RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ST18O60284 1047 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 PLA2G6O60733 806 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 METAP2P50579 478 aaKnown RBP eCLIP24.77■■□□□ 1.56
CASC4-204ENST00000557945 EVCP57679 992 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 RTN1Q16799 776 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 SYDE2Q5VT97 1194 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 CPVLQ9H3G5 476 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 SAGE1Q9NXZ1 904 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 CPA4Q9UI42 421 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 CTDP1Q9Y5B0 961 aaPredicted RBP24.77■■□□□ 1.56
CASC4-204ENST00000557945 DHX16O60231 1041 aaKnown RBP24.76■■□□□ 1.55
CASC4-204ENST00000557945 TLR2O60603 784 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 PDIA3P30101 505 aaKnown RBP24.76■■□□□ 1.55
CASC4-204ENST00000557945 GCLCP48506 637 aaPredicted RBP24.76■■□□□ 1.55
CASC4-204ENST00000557945 BTNL9Q6UXG8 535 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 GTF3C2Q8WUA4 911 aaPredicted RBP24.76■■□□□ 1.55
CASC4-204ENST00000557945 PAGR1Q9BTK6 254 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 R3HDMLQ9H3Y0 253 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 PRR12Q9ULL5 1215 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 TPCN1Q9ULQ1 816 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 CEP350Q5VT06 3117 aa24.76■■□□□ 1.55
CASC4-204ENST00000557945 GNAQP50148 359 aa24.75■■□□□ 1.55
CASC4-204ENST00000557945 RCAN1P53805 252 aa24.75■■□□□ 1.55
CASC4-204ENST00000557945 STK3Q13188 491 aa24.75■■□□□ 1.55
CASC4-204ENST00000557945 ZNF274Q96GC6 653 aaPredicted RBP24.75■■□□□ 1.55
CASC4-204ENST00000557945 RBM28Q9NW13 759 aaKnown RBP24.75■■□□□ 1.55
CASC4-204ENST00000557945 HPS5Q9UPZ3 1129 aa24.75■■□□□ 1.55
CASC4-204ENST00000557945 VWA5AO00534 786 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 ZBED4O75132 1171 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 SNAP25P60880 206 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 CCT2P78371 535 aaKnown RBP24.74■■□□□ 1.55
CASC4-204ENST00000557945 ANKRD13CQ8N6S4 541 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 VAT1LQ9HCJ6 419 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 TSKSQ9UJT2 592 aa24.74■■□□□ 1.55
CASC4-204ENST00000557945 ADGRA2Q96PE1 1338 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 PEX10O60683 326 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 LBX2Q6XYB7 198 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 ADGRF4Q8IZF3 695 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 MB21D1Q8N884 522 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 IL27Q8NEV9 243 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 LZTS2Q9BRK4 669 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 CFHR5Q9BXR6 569 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 RBPJLQ9UBG7 517 aa24.73■■□□□ 1.55
CASC4-204ENST00000557945 CCDC196A0A1B0GTZ2 297 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 PLEKHA8P1O95397 391 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 POTEEQ6S8J3 1075 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 CMTR1Q8N1G2 835 aaKnown RBP24.72■■□□□ 1.55
CASC4-204ENST00000557945 SLKQ9H2G2 1235 aaPredicted RBP24.72■■□□□ 1.55
CASC4-204ENST00000557945 TXNRD2Q9NNW7 524 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 ADAMTS5Q9UNA0 930 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 LIMCH1Q9UPQ0 1083 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 RABGAP1Q9Y3P9 1069 aa24.72■■□□□ 1.55
CASC4-204ENST00000557945 RLFQ13129 1914 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 CDC27P30260 824 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 PLS1Q14651 629 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 PPP2R5BQ15173 497 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 CCDC174Q6PII3 467 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 C17orf99Q6UX52 265 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 TMTC3Q6ZXV5 915 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 NBPF11Q86T75 865 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 CCDC82Q8N4S0 544 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 SLC38A10Q9HBR0 1119 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 NCOA5Q9HCD5 579 aaKnown RBP24.71■■□□□ 1.55
CASC4-204ENST00000557945 BTBD7Q9P203 1132 aa24.71■■□□□ 1.55
CASC4-204ENST00000557945 FDX1P10109 184 aa24.7■■□□□ 1.55
CASC4-204ENST00000557945 ADD1P35611 737 aaKnown RBP24.7■■□□□ 1.55
CASC4-204ENST00000557945 CPXCR1Q8N123 301 aa24.7■■□□□ 1.55
CASC4-204ENST00000557945 SRBD1Q8N5C6 995 aaKnown RBP24.7■■□□□ 1.55
CASC4-204ENST00000557945 GPRC5AQ8NFJ5 357 aa24.7■■□□□ 1.55
CASC4-204ENST00000557945 PIBF1Q8WXW3 757 aa24.7■■□□□ 1.55
CASC4-204ENST00000557945 FAM217BQ9NTX9 383 aaPredicted RBP24.7■■□□□ 1.55
CASC4-204ENST00000557945 PARP14Q460N5 1801 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 NID2Q14112 1375 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 CNMDO75829 334 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 LARGE1O95461 756 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 BCRP11274 1271 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 SLC4A3P48751 1232 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 TMEM132BQ14DG7 1078 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 ME3Q16798 604 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 FAM110CQ1W6H9 321 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 RANBP17Q9H2T7 1088 aaKnown RBP24.69■■□□□ 1.54
CASC4-204ENST00000557945 JMJD4Q9H9V9 463 aa24.69■■□□□ 1.54
CASC4-204ENST00000557945 RAVER2Q9HCJ3 691 aaKnown RBP24.69■■□□□ 1.54
CASC4-204ENST00000557945 PFKFB2O60825 505 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 HSPA1AP0DMV8 641 aaKnown RBP24.68■■□□□ 1.54
CASC4-204ENST00000557945 HSPA1BP0DMV9 641 aaKnown RBP24.68■■□□□ 1.54
CASC4-204ENST00000557945 ERVK-9P63128 1117 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 ERVK-24P63145 666 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 CDC37Q16543 378 aaPredicted RBP24.68■■□□□ 1.54
CASC4-204ENST00000557945 SLC35G1Q2M3R5 365 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 HOMER1Q86YM7 354 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 NECAB1Q8N987 351 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 REPS2Q8NFH8 660 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 SPZ1Q9BXG8 430 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 RIOX1Q9H6W3 641 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 MORF4L1Q9UBU8 362 aa24.68■■□□□ 1.54
CASC4-204ENST00000557945 GPR25O00155 361 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 CPLX1O14810 134 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 CYTH3O43739 400 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 SMARCA1P28370 1054 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms