RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
SNX6-208ENST00000556712 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 SNAP25P60880 206 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 SNRNP48Q6IEG0 339 aaKnown RBP12.23□□□□□ -0.45
SNX6-208ENST00000556712 RIOX2Q8IUF8 465 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 PRPF38AQ8NAV1 312 aaKnown RBP12.23□□□□□ -0.45
SNX6-208ENST00000556712 SHCBP1Q8NEM2 672 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.23□□□□□ -0.458e-7■□□□□ 9.9
SNX6-208ENST00000556712 RAVER2Q9HCJ3 691 aaKnown RBP12.23□□□□□ -0.45
SNX6-208ENST00000556712 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 CTNNA3Q9UI47 895 aa12.23□□□□□ -0.45
SNX6-208ENST00000556712 GJB1P08034 283 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 CYP21A2P08686 494 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
SNX6-208ENST00000556712 XRCC5P13010 732 aaKnown RBP12.22□□□□□ -0.45
SNX6-208ENST00000556712 STAT3P40763 770 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 STAT2P52630 851 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
SNX6-208ENST00000556712 DEFB118Q96PH6 123 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 MROH8Q9H579 483 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
SNX6-208ENST00000556712 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
SNX6-208ENST00000556712 LCTP09848 1927 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 TNKSO95271 1327 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 COBLO75128 1261 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 ZBED4O75132 1171 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 SLC25A27O95847 323 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 PGK2P07205 417 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 CCND3P30281 292 aaPredicted RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 GJA8P48165 433 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 CACNB2Q08289 660 aaPredicted RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 MMP19Q99542 508 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 ESYT1Q9BSJ8 1104 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 LSG1Q9H089 658 aaKnown RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 HOMER2Q9NSB8 354 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
SNX6-208ENST00000556712 CTDP1Q9Y5B0 961 aaPredicted RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
SNX6-208ENST00000556712 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
SNX6-208ENST00000556712 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.46
SNX6-208ENST00000556712 ZNF536O15090 1300 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 RPTORQ8N122 1335 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 ALPK3Q96L96 1907 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 HOXC6P09630 235 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 PDHBP11177 359 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 FCER1AP12319 257 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 CYP2C19P33261 490 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 SLC16A2P36021 539 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 CYB5R4Q7L1T6 521 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 FAM160B2Q86V87 743 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
SNX6-208ENST00000556712 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
SNX6-208ENST00000556712 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
SNX6-208ENST00000556712 KRT23Q9C075 422 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
SNX6-208ENST00000556712 ZSWIM5Q9P217 1185 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
SNX6-208ENST00000556712 MCM3APO60318 1980 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 E7EWF7 191 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 SGPL1O95470 568 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
SNX6-208ENST00000556712 GOLGA8HP0CJ92 632 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 KCTD2Q14681 263 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 IQCA1Q86XH1 822 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 ABRAQ8N0Z2 381 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 MAML3Q96JK9 1138 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 CPVLQ9H3G5 476 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
SNX6-208ENST00000556712 MYH6P13533 1939 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 ATP2A1O14983 1001 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 STRNO43815 780 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 FARP2O94887 1054 aaPredicted RBP12.18□□□□□ -0.46
SNX6-208ENST00000556712 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
SNX6-208ENST00000556712 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 COPB2P35606 906 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 ZNF543Q08ER8 600 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
SNX6-208ENST00000556712 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 MFSD14CQ5VZR4 134 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 CHST3Q7LGC8 479 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms