RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 PRDM10Q9NQV6 1147 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 FAM135BQ49AJ0 1406 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 ADGRB2O60241 1585 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 COL3A1P02461 1466 aaPredicted RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 NLRP1Q9C000 1473 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 PRAMEF27A3QJZ7 478 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 RLBP1P12271 317 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 OXCT1P55809 520 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 XPCQ01831 940 aaPredicted RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 PSMD2Q13200 908 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 NFE2L2Q16236 605 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 IFI16Q16666 785 aaKnown RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 TMCO4Q5TGY1 634 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 LRFN4Q6PJG9 635 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 ATF7IPQ6VMQ6 1270 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 ZNF574Q6ZN55 896 aaPredicted RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 WAPLQ7Z5K2 1190 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 UBE3DQ7Z6J8 389 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 SKAP1Q86WV1 359 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 NPAS4Q8IUM7 802 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 FTSJ3Q8IY81 847 aaKnown RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 PLPPR2Q96GM1 343 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 CHMP4AQ9BY43 222 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 SMC4Q9NTJ3 1288 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 POLKQ9UBT6 870 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 PARP2Q9UGN5 583 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 GTF2IRD1Q9UHL9 959 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 DDX19BQ9UMR2 479 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 SNCAIPQ9Y6H5 919 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 CPSF1Q10570 1443 aaKnown RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 EDC4Q6P2E9 1401 aaKnown RBP5.02□□□□□ -1.61
TGFB3-205ENST00000556507 ANKRD26Q9UPS8 1709 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 AATKQ6ZMQ8 1374 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 MYO5BQ9ULV0 1848 aa5.02□□□□□ -1.61
TGFB3-205ENST00000556507 RIMBP3CA6NJZ7 1639 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 RIMBP3BA6NNM3 1639 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 RIMBP3Q9UFD9 1639 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 KIF16BQ96L93 1317 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 TMEM265A0A087WTH1 108 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 CEACAM5P06731 702 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 ITIH2P19823 946 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 IL13P35225 146 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 MFAP1P55081 439 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 RPS26P62854 115 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 GNAI1P63096 354 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 DAB2P98082 770 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 PRKCQQ04759 706 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 HDAC1Q13547 482 aaPredicted RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 MLECQ14165 292 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 BECN1Q14457 450 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 PLCL1Q15111 1095 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 MAP3K11Q16584 847 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 MEI1Q5TIA1 1274 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 DNAJC14Q6Y2X3 702 aaPredicted RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 CYFIP1Q7L576 1253 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 SPRED2Q7Z698 418 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 SSH1Q8WYL5 1049 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 ARHGAP45Q92619 1136 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 TSR2Q969E8 191 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 GAL3ST3Q96A11 431 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 COG3Q96JB2 828 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 HRASLS5Q96KN8 279 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 HEXIM2Q96MH2 286 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 UPF2Q9HAU5 1272 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 VAV3Q9UKW4 847 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 NOB1Q9ULX3 412 aaKnown RBP5.01□□□□□ -1.61
TGFB3-205ENST00000556507 PCDHB5Q9Y5E4 795 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 U3KQE9 123 aa5.01□□□□□ -1.61
TGFB3-205ENST00000556507 CDC42BPGQ6DT37 1551 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 TECPR2O15040 1411 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 IGF2BP3O00425 579 aaKnown RBP eCLIP5□□□□□ -1.61
TGFB3-205ENST00000556507 LRIG2O94898 1065 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 TRIM27P14373 513 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 PRKAR2BP31323 418 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 TXKP42681 527 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 LIG3P49916 1009 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 ETF1P62495 437 aaKnown RBP5□□□□□ -1.61
TGFB3-205ENST00000556507 TAF1CQ15572 869 aaPredicted RBP5□□□□□ -1.61
TGFB3-205ENST00000556507 AOC3Q16853 763 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 WIPI1Q5MNZ9 446 aaPredicted RBP5□□□□□ -1.61
TGFB3-205ENST00000556507 AGMOQ6ZNB7 445 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 CBLL1Q75N03 491 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 FAM214BQ7L5A3 538 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 BCL2L13Q9BXK5 485 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 WNT10AQ9GZT5 417 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 ZBTB40Q9NUA8 1239 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 IFT57Q9NWB7 429 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 PLAGL2Q9UPG8 496 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 RNF114Q9Y508 228 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 METP08581 1390 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 TNRQ92752 1358 aa5□□□□□ -1.61
TGFB3-205ENST00000556507 PPIP5K1Q6PFW1 1433 aa4.99□□□□□ -1.61
TGFB3-205ENST00000556507 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
TGFB3-205ENST00000556507 VAMP4O75379 141 aa4.99□□□□□ -1.61
TGFB3-205ENST00000556507 ZNF853P0CG23 659 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms