RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 PRSS36Q5K4E3 855 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 RNF187Q5TA31 235 aaPredicted RBP6.19□□□□□ -1.42
CDKN3-210ENST00000556305 EGFLAMQ63HQ2 1017 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF765Q7L2R6 523 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF227Q86WZ6 799 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 ADCY4Q8NFM4 1077 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 GATA6Q92908 595 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 NOL6Q9H6R4 1146 aaKnown RBP6.19□□□□□ -1.42
CDKN3-210ENST00000556305 CHST7Q9NS84 486 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 GFOD1Q9NXC2 390 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 APEX2Q9UBZ4 518 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 A0A1W2PQU0 124 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 ESYT3A0FGR9 886 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 FAM170BA6NMN3 283 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 PPP1R12AO14974 1030 aaPredicted RBP6.18□□□□□ -1.42
CDKN3-210ENST00000556305 SHOXO15266 292 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 F13BP05160 661 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 GSNP06396 782 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 ITGAVP06756 1048 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 FSTP19883 344 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF445P59923 1031 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 POU4F1Q01851 419 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 ARHGEF39Q8N4T4 335 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 FIBCD1Q8N539 461 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 CCDC140Q96MF4 163 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 FEZ1Q99689 392 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 CGGBP1Q9UFW8 167 aaPredicted RBP6.18□□□□□ -1.42
CDKN3-210ENST00000556305 LEMD3Q9Y2U8 911 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 CAPN6Q9Y6Q1 641 aa6.18□□□□□ -1.42
CDKN3-210ENST00000556305 LRRN2O75325 713 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 FAM153BP0C7A2 387 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 ITIH2P19823 946 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 ENDOUP21128 410 aaKnown RBP6.17□□□□□ -1.42
CDKN3-210ENST00000556305 NOP2P46087 812 aaKnown RBP6.17□□□□□ -1.42
CDKN3-210ENST00000556305 CLCN7P51798 805 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 AMPD2Q01433 879 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 TNK2Q07912 1038 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 PPP2R5DQ14738 602 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 TRIM59Q8IWR1 403 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 SCUBE1Q8IWY4 988 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF655Q8N720 491 aaPredicted RBP6.17□□□□□ -1.42
CDKN3-210ENST00000556305 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 BRF1Q92994 677 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 Q96M66 194 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 HEXIM2Q96MH2 286 aaKnown RBP6.17□□□□□ -1.42
CDKN3-210ENST00000556305 GPR62Q9BZJ7 368 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 EMC9Q9Y3B6 208 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 PRKAB1Q9Y478 270 aa6.17□□□□□ -1.42
CDKN3-210ENST00000556305 SSU72P8A0A1W2PR75 194 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 ADCY3O60266 1144 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 KCNH1O95259 989 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 PRAMEF1O95521 474 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 CEACAM5P06731 702 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 FGFR1P11362 822 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
CDKN3-210ENST00000556305 RBM10P98175 930 aaKnown RBP6.16□□□□□ -1.42
CDKN3-210ENST00000556305 SQSTM1Q13501 440 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 FAM214BQ7L5A3 538 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 THAP5Q7Z6K1 395 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 DAGLBQ8NCG7 672 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 ZDHHC15Q96MV8 337 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 LRRC4CQ9HCJ2 640 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 ARHGEF4Q9NR80 690 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDKN3-210ENST00000556305 PLAAQ9Y263 795 aa6.16□□□□□ -1.42
CDKN3-210ENST00000556305 TMEM265A0A087WTH1 108 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 TRBV23-1A0A0A0MS06 115 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 CYP26A1O43174 497 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 ASMTLO95671 621 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 CPP00450 1065 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 HOXC12P31275 282 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 KCNJ6P48051 423 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 SNW1Q13573 536 aaKnown RBP6.15□□□□□ -1.42
CDKN3-210ENST00000556305 IFI16Q16666 785 aaKnown RBP6.15□□□□□ -1.42
CDKN3-210ENST00000556305 CDKAL1Q5VV42 579 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 NSMFQ6X4W1 530 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 KCTD13Q8WZ19 329 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 SYTL4Q96C24 671 aaPredicted RBP6.15□□□□□ -1.42
CDKN3-210ENST00000556305 MRGPRX3Q96LB0 322 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 DHRS4Q9BTZ2 278 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 PIM2Q9P1W9 311 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 RNF112Q9ULX5 631 aa6.15□□□□□ -1.42
CDKN3-210ENST00000556305 DNAJC25-GNG10A0A024R161 153 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 PRR33A8MZF0 331 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 MEIS1O00470 390 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 PRODHO43272 600 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 HYAL3O43820 417 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 PABPC1P11940 636 aaKnown RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 OXCT1P55809 520 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 GTF2IRD2BQ6EKJ0 949 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 KIAA0907Q7Z7F0 614 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 GTF2IRD2Q86UP8 949 aa6.14□□□□□ -1.43
CDKN3-210ENST00000556305 ZNF513Q8N8E2 541 aaPredicted RBP6.14□□□□□ -1.43
CDKN3-210ENST00000556305 ZCRB1Q8TBF4 217 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms