RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 COL6A1P12109 1028 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 BMP3P12645 472 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 CYBAP13498 195 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 FAM47AQ5JRC9 791 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
SNX6-207ENST00000556303 CHURC1Q8WUH1 139 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 RILPL2Q969X0 211 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 SLC38A10Q9HBR0 1119 aa14.94□□□□□ -0.02
SNX6-207ENST00000556303 CTDP1Q9Y5B0 961 aaPredicted RBP14.94□□□□□ -0.02
SNX6-207ENST00000556303 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
SNX6-207ENST00000556303 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
SNX6-207ENST00000556303 A0A0D9SFI3 127 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 SDSP20132 328 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 CYP2C19P33261 490 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 VPS53Q5VIR6 699 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
SNX6-207ENST00000556303 FAM160B2Q86V87 743 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 FAM227BQ96M60 508 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 NUP88Q99567 741 aaPredicted RBP14.93□□□□□ -0.02
SNX6-207ENST00000556303 TCP11L1Q9NUJ3 509 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
SNX6-207ENST00000556303 COLQQ9Y215 455 aaPredicted RBP14.93□□□□□ -0.02
SNX6-207ENST00000556303 CCDC171Q6TFL3 1326 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 LAMA3Q16787 3333 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 A0A1W2PPC1 479 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 SEPT4O43236 478 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
SNX6-207ENST00000556303 CNGA1P29973 690 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 SLC1A4P43007 532 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 STAT2P52630 851 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 CTDSPL2Q05D32 466 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 ZNF792Q3KQV3 632 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 SNRNP48Q6IEG0 339 aaKnown RBP14.92□□□□□ -0.02
SNX6-207ENST00000556303 ARRDC4Q8NCT1 418 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 CHST13Q8NET6 341 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 STAG1Q8WVM7 1258 aa14.92□□□□□ -0.02
SNX6-207ENST00000556303 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
SNX6-207ENST00000556303 SZT2Q5T011 3432 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 DNM1LO00429 736 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
SNX6-207ENST00000556303 RCSD1Q6JBY9 416 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
SNX6-207ENST00000556303 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
SNX6-207ENST00000556303 TRPV1Q8NER1 839 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 TINF2Q9BSI4 451 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
SNX6-207ENST00000556303 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 PCDH10Q9P2E7 1040 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 STX8Q9UNK0 236 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 PFASO15067 1338 aa14.91□□□□□ -0.02
SNX6-207ENST00000556303 TMEM232C9JQI7 657 aa14.9□□□□□ -0.02
SNX6-207ENST00000556303 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
SNX6-207ENST00000556303 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
SNX6-207ENST00000556303 TTC14Q96N46 770 aa14.9□□□□□ -0.02
SNX6-207ENST00000556303 DNAJC25-GNG10A0A024R161 153 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 MCCP23508 829 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 BMP8BP34820 402 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 MAMDC4Q6UXC1 1216 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 MFSD6Q6ZSS7 791 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 DCAF4Q8WV16 495 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 RIPK3Q9Y572 518 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 SYNGAP1Q96PV0 1343 aa14.89□□□□□ -0.03
SNX6-207ENST00000556303 PGK2P07205 417 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
SNX6-207ENST00000556303 FXR1P51114 621 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNX6-207ENST00000556303 CCDC178Q5BJE1 867 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 DSCC1Q9BVC3 393 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
SNX6-207ENST00000556303 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
SNX6-207ENST00000556303 PNMA2Q9UL42 364 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 CNPY2Q9Y2B0 182 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 TACC3Q9Y6A5 838 aa14.88□□□□□ -0.03
SNX6-207ENST00000556303 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 ZNF213O14771 459 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
SNX6-207ENST00000556303 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
SNX6-207ENST00000556303 BTNL9Q6UXG8 535 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 C7orf61Q8IZ16 206 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 ANKRD35Q8N283 1001 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 ESR2Q92731 530 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
SNX6-207ENST00000556303 ACAD9Q9H845 621 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 TOMM22Q9NS69 142 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 CTNNA3Q9UI47 895 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 ALPK3Q96L96 1907 aa14.87□□□□□ -0.03
SNX6-207ENST00000556303 NMT2O60551 498 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
SNX6-207ENST00000556303 RARBP10826 455 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 AKR1A1P14550 325 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms