RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 TGFB2P61812 414 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 TPM4P67936 248 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 POSTNQ15063 836 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 TATDN1Q6P1N9 297 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 OGFOD1Q8N543 542 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 PRMT6Q96LA8 375 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 KANSL2Q9H9L4 492 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 SERTAD1Q9UHV2 236 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ATP2B2Q01814 1243 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 DRC7Q8IY82 874 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 PDILTQ8N807 584 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 MKL1Q969V6 931 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 EPSTI1Q96J88 318 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 PIM2Q9P1W9 311 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 PCDHA5Q9Y5H7 936 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 LAD1O00515 517 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 IKBKBO14920 756 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNF500O60304 480 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 NT5DC1Q5TFE4 455 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 CLEC10AQ8IUN9 316 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 SPC24Q8NBT2 197 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 SMARCE1Q969G3 411 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
EFCAB11-209ENST00000556005 ATRNL1Q5VV63 1379 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 MYH8P13535 1937 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 PSMD14O00487 310 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 RAD17O75943 681 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 POLD1P28340 1107 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 CDC25BP30305 580 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 NONOQ15233 471 aaKnown RBP eCLIP11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 DLGAP5Q15398 846 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 INF2Q27J81 1249 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 TMEM179Q6ZVK1 233 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 TRIML1Q8N9V2 468 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 DHX58Q96C10 678 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 FOXN1O15353 648 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 SMC2O95347 1197 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 TXLNAP40222 546 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 CCDC96Q2M329 555 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 DTHD1Q6ZMT9 781 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 NIM1KQ8IY84 436 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 ADGRF4Q8IZF3 695 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 IQUBQ8NA54 791 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 DACH1Q9UI36 760 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 GOLGB1Q14789 3259 aaKnown RBP11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
EFCAB11-209ENST00000556005 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 MLKLQ8NB16 471 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 AGBL3Q8NEM8 1001 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 SPATA20Q8TB22 786 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 CSRNP1Q96S65 589 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 GMLQ99445 158 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
EFCAB11-209ENST00000556005 A0A087X0B3 334 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 ZBTB5O15062 677 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 PRPHP41219 470 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 SLC1A4P43007 532 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 ADCY7P51828 1080 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 ICA1Q05084 483 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 ORC2Q13416 577 aaPredicted RBP11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 IL17AQ16552 155 aa11.46□□□□□ -0.58
EFCAB11-209ENST00000556005 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms