RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	SENP2	Q9HC62	589 aa		13.21	□□□□□ -0.29
RAD51B-222	ENST00000555907	SLC12A7	Q9Y666	1083 aa		13.21	□□□□□ -0.29
RAD51B-222	ENST00000555907	MYH8	P13535	1937 aa		13.21	□□□□□ -0.3
RAD51B-222	ENST00000555907	NID2	Q14112	1375 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	SZT2	Q5T011	3432 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	ADGRA2	Q96PE1	1338 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	KLF18	A0A0U1RQI7	1052 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	USP17L5	A8MUK1	530 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	DDAH1	O94760	285 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	TFRC	P02786	760 aa	Known RBP	13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	EEF2	P13639	858 aa	Known RBP	13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	FCGRT	P55899	365 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	SPP2	Q13103	211 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	NFXL1	Q6ZNB6	911 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	CATIP	Q7Z7H3	387 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	ZNF654	Q8IZM8	581 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	INTS4	Q96HW7	963 aa	Known RBP	13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	KAT14	Q9H8E8	782 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	CLIP2	Q9UDT6	1046 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	STX8	Q9UNK0	236 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	TMX2	Q9Y320	296 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	LOC285556	D6RIA3	1793 aa		13.2	□□□□□ -0.3
RAD51B-222	ENST00000555907	ALPK3	Q96L96	1907 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	ZBTB43	O43298	467 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	SNHG28	P0DPA3	235 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	ICA1	Q05084	483 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	RAB3GAP1	Q15042	981 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	FANCB	Q8NB91	859 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	ZNF280C	Q8ND82	737 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	PNMA1	Q8ND90	353 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	GMCL1P1	Q8NEA9	526 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	IPO9	Q96P70	1041 aa	Known RBP	13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	LARP6	Q9BRS8	491 aa	Known RBP	13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	SLK	Q9H2G2	1235 aa	Predicted RBP	13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	SH2D4A	Q9H788	454 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	ARHGEF10L	Q9HCE6	1279 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	SLC45A1	Q9Y2W3	748 aa		13.19	□□□□□ -0.3
RAD51B-222	ENST00000555907	DOCK3	Q8IZD9	2030 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	CCDC196	A0A1B0GTZ2	297 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	DHX16	O60231	1041 aa	Known RBP	13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	ADCY3	O60266	1144 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	BCR	P11274	1271 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	TREML2	Q5T2D2	321 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	UBE2Q1	Q7Z7E8	422 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	GTF3C6	Q969F1	213 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	DEFB118	Q96PH6	123 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	LLPH	Q9BRT6	129 aa	Known RBP	13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	AS3MT	Q9HBK9	375 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907	AGTPBP1	Q9UPW5	1226 aa		13.18	□□□□□ -0.3
RAD51B-222	ENST00000555907		A0A1W2PRG0	241 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	LARGE1	O95461	756 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	SGPL1	O95470	568 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	INHA	P05111	366 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	SMARCA1	P28370	1054 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	GNAQ	P50148	359 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	HMGCS2	P54868	508 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	C7orf61	Q8IZ16	206 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	SLAIN1	Q8ND83	568 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	GMCL1	Q96IK5	515 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	LZTS2	Q9BRK4	669 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	KIAA1683	Q9H0B3	1180 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	PRO3102	Q9H379	93 aa		13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	RBM28	Q9NW13	759 aa	Known RBP	13.17	□□□□□ -0.3
RAD51B-222	ENST00000555907	PALM3	A6NDB9	673 aa	Predicted RBP	13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	GOLGA8B	A8MQT2	603 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907		F5H6K3	240 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	KIF5B	P33176	963 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	FLT3LG	P49771	235 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	METAP2	P50579	478 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	KLRC3	Q07444	240 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	ST3GAL1	Q11201	340 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	SCRN1	Q12765	414 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	GRM4	Q14833	912 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907		Q7L0L9	218 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	ACER1	Q8TDN7	264 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	DIS3L	Q8TF46	1054 aa	Known RBP	13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	DCAF4	Q8WV16	495 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	PAWR	Q96IZ0	340 aa	Known RBP	13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	PNMA3	Q9UL41	463 aa		13.16	□□□□□ -0.3
RAD51B-222	ENST00000555907	GOLGA8A	A7E2F4	631 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	C19orf81	C9J6K1	198 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	USP17L10	C9JJH3	530 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	TNPO2	O14787	897 aa	Known RBP	13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	PLA2G6	O60733	806 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	PDHB	P11177	359 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	IFNAR1	P17181	557 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	SYN1	P17600	705 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	ADD1	P35611	737 aa	Known RBP	13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	USP14	P54578	494 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	BACE1	P56817	501 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	MTMR2	Q13614	643 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	NTRK3	Q16288	839 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	RTN1	Q16799	776 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	SH3D19	Q5HYK7	790 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms