RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 CRHR2Q13324 411 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 CCDC96Q2M329 555 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 NOM1Q5C9Z4 860 aaKnown RBP14.78□□□□□ -0.04
SYNE2-219ENST00000555323 MB21D1Q8N884 522 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 MYL10Q9BUA6 226 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 RIOX1Q9H6W3 641 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
SYNE2-219ENST00000555323 RBPJLQ9UBG7 517 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 PRR12Q9ULL5 1215 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 TPCN1Q9ULQ1 816 aa14.78□□□□□ -0.04
SYNE2-219ENST00000555323 CCDC196A0A1B0GTZ2 297 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 VWA5AO00534 786 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 ST18O60284 1047 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 TRPA1O75762 1119 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 BCRP11274 1271 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 RXRAP19793 462 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 MICU3Q86XE3 530 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 REPS2Q8NFH8 660 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 SMCR8Q8TEV9 937 aaPredicted RBP14.77□□□□□ -0.05
SYNE2-219ENST00000555323 MTMR8Q96EF0 704 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 UBA5Q9GZZ9 404 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 LIMCH1Q9UPQ0 1083 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.05
SYNE2-219ENST00000555323 ATP2A1O14983 1001 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 CYTH3O43739 400 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 PFKFB2O60825 505 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 CDC27P30260 824 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 SLC16A2P36021 539 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 MCM2P49736 904 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 METAP2P50579 478 aaKnown RBP eCLIP14.76□□□□□ -0.05
SYNE2-219ENST00000555323 RTN1Q16799 776 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 SLC35G1Q2M3R5 365 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 SYDE2Q5VT97 1194 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 NBPF11Q86T75 865 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 CHMP4CQ96CF2 233 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 ATG4CQ96DT6 458 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
SYNE2-219ENST00000555323 BEGAINQ9BUH8 593 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 SPZ1Q9BXG8 430 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 RANBP17Q9H2T7 1088 aaKnown RBP14.76□□□□□ -0.05
SYNE2-219ENST00000555323 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 RLFQ13129 1914 aa14.76□□□□□ -0.05
SYNE2-219ENST00000555323 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 CNMDO75829 334 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 TBC1D8O95759 1140 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ADD1P35611 737 aaKnown RBP14.75□□□□□ -0.05
SYNE2-219ENST00000555323 OAZ1P54368 228 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 FUT2Q10981 343 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 NTRK3Q16288 839 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ME3Q16798 604 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 FAM110CQ1W6H9 321 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 Q3C1V9 767 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 TMTC3Q6ZXV5 915 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ADGRF4Q8IZF3 695 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 SRBD1Q8N5C6 995 aaKnown RBP14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ZSCAN31Q96LW9 406 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-219ENST00000555323 JMJD4Q9H9V9 463 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 TXNRD2Q9NNW7 524 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 BTBD7Q9P203 1132 aa14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ZNF214Q9UL59 606 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-219ENST00000555323 ZBED4O75132 1171 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 PLEKHA8P1O95397 391 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 IKQ13123 557 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-219ENST00000555323 TMEM132BQ14DG7 1078 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 RAB11FIP4Q86YS3 637 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 GPRC5AQ8NFJ5 357 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-219ENST00000555323 CPVLQ9H3G5 476 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 PNMA2Q9UL42 364 aa14.74□□□□□ -0.05
SYNE2-219ENST00000555323 ZNF536O15090 1300 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
SYNE2-219ENST00000555323 ERVK-9P63128 1117 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 ERVK-24P63145 666 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
SYNE2-219ENST00000555323 SCRN1Q12765 414 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 ANKRD13CQ8N6S4 541 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 SNX21Q969T3 373 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-219ENST00000555323 CPA4Q9UI42 421 aa14.73□□□□□ -0.05
SYNE2-219ENST00000555323 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
SYNE2-219ENST00000555323 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-219ENST00000555323 PCNTO95613 3336 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 GPR25O00155 361 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 ZBTB5O15062 677 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
SYNE2-219ENST00000555323 LARGE1O95461 756 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 ICAM1P05362 532 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 IFNAR1P17181 557 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 STAT3P40763 770 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 RIOX2Q8IUF8 465 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
SYNE2-219ENST00000555323 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms