RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PRPF38AQ8NAV1 312 aaKnown RBP18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 CEP95Q96GE4 821 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 XPNPEP3Q9NQH7 507 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 CLIP2Q9UDT6 1046 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PRKAG2Q9UGJ0 569 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 PHF24Q9UPV7 400 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 RIPK3Q9Y572 518 aa18.72■□□□□ 0.59
ARHGEF40-205ENST00000555052 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 LRRFIP1Q32MZ4 808 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 MSL3Q8N5Y2 521 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 ZNF287Q9HBT7 754 aa18.71■□□□□ 0.59
ARHGEF40-205ENST00000555052 ERC2O15083 957 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 APPP05067 770 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 SLC17A8Q8NDX2 589 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 GMCL1P1Q8NEA9 526 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 SLC38A10Q9HBR0 1119 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 SYNGAP1Q96PV0 1343 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 MCM3APO60318 1980 aa18.7■□□□□ 0.58
ARHGEF40-205ENST00000555052 POTEB2H3BUK9 544 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 TTLL1O95922 423 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 PGK1P00558 417 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 AKR1A1P14550 325 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 FAM109BQ6ICB4 259 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 MAMDC4Q6UXC1 1216 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 NEDD1Q8NHV4 660 aa18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 LENG1Q96BZ8 264 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF40-205ENST00000555052 TRIM43BA6NCK2 446 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 FOXP2O15409 715 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 ZBED4O75132 1171 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 SNAI1O95863 264 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 TLE2Q04725 743 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 SH3RF1Q7Z6J0 888 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 ZNF467Q7Z7K2 595 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 RNF180Q86T96 592 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 KIFC2Q96AC6 838 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 TRIM43Q96BQ3 446 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 FGD4Q96M96 766 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 PRDM5Q9NQX1 630 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 FEM1BQ9UK73 627 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 SPTBN5Q9NRC6 3674 aaKnown RBP18.68■□□□□ 0.58
ARHGEF40-205ENST00000555052 A0A1W2PQ45 241 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 A0A1W2PQY0 241 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 MX1P20591 662 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 OAZ1P54368 228 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 PDE4BQ07343 736 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 CPXCR1Q8N123 301 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 BADQ92934 168 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 NAPBQ9H115 298 aa18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
ARHGEF40-205ENST00000555052 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 PPARAQ07869 468 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 SHHQ15465 462 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 C9orf50Q5SZB4 431 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 DDX11Q96FC9 970 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 TSEN34Q9BSV6 310 aaKnown RBP18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 SYNRGQ9UMZ2 1314 aa18.66■□□□□ 0.58
ARHGEF40-205ENST00000555052 CHD7Q9P2D1 2997 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 BMP3P12645 472 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 ITGB8P26012 769 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 TFAP4Q01664 338 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 SLFN13Q68D06 897 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 CCSAPQ6IQ19 270 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 KLHDC9Q8NEP7 349 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 CHST13Q8NET6 341 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 GMCL1Q96IK5 515 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 GUCD1Q96NT3 240 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 FBXO40Q9UH90 709 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
ARHGEF40-205ENST00000555052 SLC3A2P08195 630 aaKnown RBP18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 CLTBP09497 229 aa18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 FDX1P10109 184 aa18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 ZHX1Q9UKY1 873 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 CTDP1Q9Y5B0 961 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
ARHGEF40-205ENST00000555052 TMEM232C9JQI7 657 aa18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 KIAA0355O15063 1070 aa18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 ADCY6O43306 1168 aa18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 DUSP11O75319 330 aaKnown RBP18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 CST5P28325 142 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 ACLYP53396 1101 aa18.63■□□□□ 0.57
ARHGEF40-205ENST00000555052 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms