RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ISY1Q9ULR0 285 aaKnown RBP28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 MTMR7Q9Y216 660 aa28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 ZNFX1Q9P2E3 1918 aaKnown RBP28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 PRC1O43663 620 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 HMGB1P09429 215 aaKnown RBP28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 IKQ13123 557 aaPredicted RBP28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 IRF5Q13568 498 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 TMEM67Q5HYA8 995 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 GPR142Q7Z601 462 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 PLEKHH3Q7Z736 793 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 RIOX2Q8IUF8 465 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 SOCS4Q8WXH5 440 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 MROH8Q9H579 483 aa28.36■■■□□ 2.13
SDR39U1-209ENST00000554947 ECM2O94769 699 aaPredicted RBP28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 STAT3P40763 770 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 PRKCZQ05513 592 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 ASPRV1Q53RT3 343 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 RASGRP2Q7LDG7 609 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 CHST3Q7LGC8 479 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 TEX13BQ9BXU2 312 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 GJD2Q9UKL4 321 aa28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 CTDP1Q9Y5B0 961 aaPredicted RBP28.35■■■□□ 2.13
SDR39U1-209ENST00000554947 ZNF236Q9UL36 1845 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 LIFRP42702 1097 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 PLS1Q14651 629 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 PRR12Q9ULL5 1215 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 HPS5Q9UPZ3 1129 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 PTCH2Q9Y6C5 1203 aa28.34■■■□□ 2.13
SDR39U1-209ENST00000554947 STRNO43815 780 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 ERCC3P19447 782 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 FLT3LGP49771 235 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 ADCK5Q3MIX3 580 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 SYDE2Q5VT97 1194 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 DHX32Q7L7V1 743 aaKnown RBP28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 RAET1EQ8TD07 263 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 ABHD8Q96I13 439 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 NUDT12Q9BQG2 462 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 LY9Q9HBG7 655 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 CWC22Q9HCG8 908 aaKnown RBP28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 GABRQQ9UN88 632 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 SNX14Q9Y5W7 946 aa28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 FRMPD2Q68DX3 1309 aaPredicted RBP28.33■■■□□ 2.13
SDR39U1-209ENST00000554947 SLC15A5A6NIM6 579 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 SH2B2O14492 632 aaPredicted RBP28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 PARP1P09874 1014 aaKnown RBP28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 EXOSC10Q01780 885 aaKnown RBP28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 MORN1Q5T089 497 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 TTBK2Q6IQ55 1244 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 CHMP4CQ96CF2 233 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 GPCPD1Q9NPB8 672 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 IVNS1ABPQ9Y6Y0 642 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 HTTP42858 3142 aa28.32■■■□□ 2.12
SDR39U1-209ENST00000554947 PTPREP23469 700 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 CATIPQ7Z7H3 387 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 ABRAQ8N0Z2 381 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 PXYLP1Q8TE99 480 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 USP6NLQ92738 828 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 MAP3K14Q99558 947 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 RANBP17Q9H2T7 1088 aaKnown RBP28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 MYH6P13533 1939 aa28.31■■■□□ 2.12
SDR39U1-209ENST00000554947 XRCC5P13010 732 aaKnown RBP28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 PSMA5P28066 241 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 GRB14Q14449 540 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 SNRNP48Q6IEG0 339 aaKnown RBP28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 NCAPG2Q86XI2 1143 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 SLAIN1Q8ND83 568 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 ARMC5Q96C12 935 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 PNMA2Q9UL42 364 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 GTF3C3Q9Y5Q9 886 aa28.3■■■□□ 2.12
SDR39U1-209ENST00000554947 TROAPQ12815 778 aa28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 COL9A3Q14050 684 aaPredicted RBP28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 WDR78Q5VTH9 848 aa28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 NBPF11Q86T75 865 aa28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 SGMS1Q86VZ5 419 aa28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 SENP2Q9HC62 589 aa28.29■■■□□ 2.12
SDR39U1-209ENST00000554947 DDAH1O94760 285 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 SLC16A2P36021 539 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 RGS2P41220 211 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 GRM4Q14833 912 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 TKFCQ3LXA3 575 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 SLC9C1Q4G0N8 1177 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 TRMT44Q8IYL2 757 aaKnown RBP28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 CPXCR1Q8N123 301 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 RAVER2Q9HCJ3 691 aaKnown RBP28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 SMCHD1A6NHR9 2005 aa28.28■■■□□ 2.12
SDR39U1-209ENST00000554947 ZNF536O15090 1300 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 PALM3A6NDB9 673 aaPredicted RBP28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 GOLGA8HP0CJ92 632 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 GRK4P32298 578 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 MAP2K5Q13163 448 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 CHST13Q8NET6 341 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 JAKMIP1Q96N16 626 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 FBXO40Q9UH90 709 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 MAD2L2Q9UI95 211 aa28.27■■■□□ 2.12
SDR39U1-209ENST00000554947 CCDC69A6NI79 296 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 ADCY3O60266 1144 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 HOXC6P09630 235 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 FCER1AP12319 257 aa28.26■■■□□ 2.11
SDR39U1-209ENST00000554947 BLOC1S2Q6QNY1 142 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms