RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 MB21D1Q8N884 522 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 RMND1Q9NWS8 449 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 CICQ96RK0 1608 aaPredicted RBP18.66■□□□□ 0.58
XRCC3-209ENST00000554913 ZNF804BA4D1E1 1349 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 H7C1D1 291 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 SRGAP2O75044 1071 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 STAT6P42226 847 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 TRAPPC10P48553 1259 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 HERVK_113P62684 666 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 WDR59Q6PJI9 974 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 C4orf32Q8N8J7 132 aa18.66■□□□□ 0.58
XRCC3-209ENST00000554913 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
XRCC3-209ENST00000554913 LUC7L2Q9Y383 392 aaKnown RBP18.66■□□□□ 0.58
XRCC3-209ENST00000554913 VGLL3A8MV65 326 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 TRIM66O15016 1216 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 ATP1A1P05023 1023 aaKnown RBP18.65■□□□□ 0.58
XRCC3-209ENST00000554913 WDR93Q6P2C0 686 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 PYM1Q9BRP8 204 aaKnown RBP18.65■□□□□ 0.58
XRCC3-209ENST00000554913 COL4A1P02462 1669 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 PSMD14O00487 310 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 SLC20A2Q08357 652 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 PFKFB3Q16875 520 aaPredicted RBP18.65■□□□□ 0.58
XRCC3-209ENST00000554913 HSP90B2PQ58FF3 399 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 INTS5Q6P9B9 1019 aaKnown RBP18.65■□□□□ 0.58
XRCC3-209ENST00000554913 FOXR1Q6PIV2 292 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 LEKR1Q6ZMV7 388 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 RASGRP4Q8TDF6 673 aa18.65■□□□□ 0.58
XRCC3-209ENST00000554913 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.58
XRCC3-209ENST00000554913 PP2D1A8MPX8 630 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 LGALS16A8MUM7 142 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 MYO1CO00159 1063 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 NAALADL2Q58DX5 795 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 FAM71BQ8TC56 605 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 DNAJC7Q99615 494 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 HAUS4Q9H6D7 363 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.57
XRCC3-209ENST00000554913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
XRCC3-209ENST00000554913 LTBP4Q8N2S1 1624 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 NTSR2O95665 410 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 TUBBP07437 444 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 USP14P54578 494 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 ZNF507Q8TCN5 953 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 EEF2KMTQ96G04 330 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 PLIN2Q99541 437 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 TSPYL1Q9H0U9 437 aa18.64■□□□□ 0.57
XRCC3-209ENST00000554913 GNL3LQ9NVN8 582 aaKnown RBP18.64■□□□□ 0.57
XRCC3-209ENST00000554913 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-209ENST00000554913 LONP1P36776 959 aaKnown RBP18.63■□□□□ 0.57
XRCC3-209ENST00000554913 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
XRCC3-209ENST00000554913 C10orf67Q8IYJ2 551 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 GPKOWQ92917 476 aaPredicted RBP eCLIP18.63■□□□□ 0.57
XRCC3-209ENST00000554913 CAPZA3Q96KX2 299 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 CYP2D6P10635 497 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
XRCC3-209ENST00000554913 TRIM34Q9BYJ4 488 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 DISC1Q9NRI5 854 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 SAR1BQ9Y6B6 198 aa18.63■□□□□ 0.57
XRCC3-209ENST00000554913 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 SRLQ86TD4 932 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 A0A0G2JS52 829 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 RCCD1A6NED2 376 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 BLIDQ8IZY5 108 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 AGPAT5Q9NUQ2 364 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
XRCC3-209ENST00000554913 RRP15Q9Y3B9 282 aaKnown RBP18.62■□□□□ 0.57
XRCC3-209ENST00000554913 A0A1W2PQC6 194 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 B4DLN1 442 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 ZMYND10O75800 440 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 PCP11498 1178 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 SLC4A8Q2Y0W8 1093 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 PARP10Q53GL7 1025 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 GDAP1L1Q96MZ0 367 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 LACRTQ9GZZ8 138 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 TMEM60Q9H2L4 133 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 FAM204AQ9H8W3 233 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 PDS5AQ29RF7 1337 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 KLRC4O43908 158 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 ORC4O43929 436 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 EEF1GP26641 437 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 TNNT3P45378 269 aaPredicted RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 KLK7P49862 253 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 PAPD7Q5XG87 772 aaKnown RBP18.61■□□□□ 0.57
XRCC3-209ENST00000554913 MED4Q9NPJ6 270 aa18.61■□□□□ 0.57
XRCC3-209ENST00000554913 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
XRCC3-209ENST00000554913 SYF2O95926 243 aaKnown RBP18.6■□□□□ 0.57
XRCC3-209ENST00000554913 C3orf67Q6ZVT6 689 aa18.6■□□□□ 0.57
XRCC3-209ENST00000554913 KIAA1328Q86T90 577 aa18.6■□□□□ 0.57
XRCC3-209ENST00000554913 LRRC15Q8TF66 581 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms