RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SYPP08247 313 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 BMP8BP34820 402 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 AFMP43652 599 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
SCFD1-214ENST00000554819 ZNF143P52747 638 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-214ENST00000554819 TEKQ02763 1124 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 DUSP4Q13115 394 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 LARP1BQ659C4 914 aaKnown RBP6.33□□□□□ -1.4
SCFD1-214ENST00000554819 ANKS3Q6ZW76 656 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 FLAD1Q8NFF5 587 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 APBA2Q99767 749 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 ADAMTS10Q9H324 1103 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-214ENST00000554819 CTNND2Q9UQB3 1225 aa6.33□□□□□ -1.4
SCFD1-214ENST00000554819 EPHX1P07099 455 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 RAC2P15153 192 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 RPL10P27635 214 aaKnown RBP6.32□□□□□ -1.4
SCFD1-214ENST00000554819 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
SCFD1-214ENST00000554819 SPPL2CQ8IUH8 684 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 FIBCD1Q8N539 461 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 OXR1Q8N573 874 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 BRF1Q92994 677 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 KLHL25Q9H0H3 589 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 ZMYM5Q9UJ78 669 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 MINPP1Q9UNW1 487 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 ZNF281Q9Y2X9 895 aa6.32□□□□□ -1.4
SCFD1-214ENST00000554819 DDAH1O94760 285 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 ZGLP1P0C6A0 271 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 VAV1P15498 845 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 ITGB5P18084 799 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 CTSKP43235 329 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 HK2P52789 917 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 POU4F1Q01851 419 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 C6orf15Q6UXA7 325 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-214ENST00000554819 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 FAM178BQ8IXR5 827 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 CKAP2LQ8IYA6 745 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 ARMC5Q96C12 935 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 ASIC4Q96FT7 647 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 RCC1LQ96I51 464 aaKnown RBP6.31□□□□□ -1.4
SCFD1-214ENST00000554819 NOL6Q9H6R4 1146 aaKnown RBP6.31□□□□□ -1.4
SCFD1-214ENST00000554819 SUGT1Q9Y2Z0 365 aa6.31□□□□□ -1.4
SCFD1-214ENST00000554819 FITM1A5D6W6 292 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 FKTNO75072 461 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 ZNF205O95201 554 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 CHRNEQ04844 493 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 CRTC3Q6UUV7 619 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-214ENST00000554819 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
SCFD1-214ENST00000554819 FGD4Q96M96 766 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 HIRIP3Q9BW71 556 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-214ENST00000554819 C19orf73Q9NVV2 129 aa6.3□□□□□ -1.4
SCFD1-214ENST00000554819 H0Y8X5 98 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
SCFD1-214ENST00000554819 KLF4O43474 513 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 HPXP02790 462 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCFD1-214ENST00000554819 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 ADCY4Q8NFM4 1077 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 LINC01599Q8WXQ3 324 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 MYLIPQ8WY64 445 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 KIRREL1Q96J84 757 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 FCRL2Q96LA5 508 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-214ENST00000554819 CDADC1Q9BWV3 514 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 TRIM55Q9BYV6 548 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 SUSD2Q9UGT4 822 aa6.29□□□□□ -1.4
SCFD1-214ENST00000554819 TMEM82A0PJX8 343 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
SCFD1-214ENST00000554819 PAPLNO95428 1278 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 KIR2DL1P43626 348 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-214ENST00000554819 KIR2DL2P43627 348 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-214ENST00000554819 GRB10Q13322 594 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 RAB33AQ14088 237 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 NR0B2Q15466 257 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 EEPD1Q7L9B9 569 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 BVESQ8NE79 360 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 ABHD4Q8TB40 342 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 ZDHHC15Q96MV8 337 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 SLC12A9Q9BXP2 914 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 EPN3Q9H201 632 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 AKT3Q9Y243 479 aa6.28□□□□□ -1.4
SCFD1-214ENST00000554819 PAX4O43316 350 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 GJB6O95452 261 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 GSTM1P09488 218 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 KCNMB1Q16558 191 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 DDR2Q16832 855 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 SOGA3Q5TF21 947 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 NBPF6Q5VWK0 638 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms