RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PHLPP2Q6ZVD8 1323 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 OR52Z1P0C646 297 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 BIN2Q9UBW5 565 aaPredicted RBP15.37■□□□□ 0.05
VTI1B-204ENST00000554659 STX2P32856 288 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 IWS1Q96ST2 819 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 GPR108Q9NPR9 543 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 USTQ9Y2C2 406 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 CAPN7Q9Y6W3 813 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 USP17L12C9JPN9 530 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 USP17L21D6R901 530 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
VTI1B-204ENST00000554659 GPBP1Q86WP2 473 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 GABPB2Q8TAK5 448 aaPredicted RBP15.36■□□□□ 0.05
VTI1B-204ENST00000554659 TGFBRAP1Q8WUH2 860 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 NRBP1Q9UHY1 535 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 PCP11498 1178 aaKnown RBP15.36■□□□□ 0.05
VTI1B-204ENST00000554659 UBE3CQ15386 1083 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 KCNG1Q9UIX4 513 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 MAP7Q14244 749 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 BCAS4Q8TDM0 211 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 SYMPKQ92797 1274 aaKnown RBP15.36■□□□□ 0.05
VTI1B-204ENST00000554659 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
VTI1B-204ENST00000554659 NEK8Q86SG6 692 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 AFAP1L2Q8N4X5 818 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 ARMCX3Q9UH62 379 aaPredicted RBP15.35■□□□□ 0.05
VTI1B-204ENST00000554659 STK38LQ9Y2H1 464 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 ATP10AO60312 1499 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 KCNQ3O43525 872 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 GRK7Q8WTQ7 553 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 FOXP1Q9H334 677 aaPredicted RBP15.35■□□□□ 0.05
VTI1B-204ENST00000554659 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
VTI1B-204ENST00000554659 PCDHB13Q9Y5F0 798 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 NSUN7Q8NE18 718 aaKnown RBP15.35■□□□□ 0.05
VTI1B-204ENST00000554659 PDE11AQ9HCR9 933 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 TOM1O60784 492 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 GCKP35557 465 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 MAEAQ7L5Y9 396 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 VPS37BQ9H9H4 285 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
VTI1B-204ENST00000554659 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 SETSIPP0DME0 302 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 TROVE2P10155 538 aaKnown RBP eCLIP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 TECP42680 631 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 DMTNQ08495 405 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 RAB3IPQ96QF0 476 aaPredicted RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 PCCAP05165 728 aaPredicted RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 METTL14Q9HCE5 456 aaKnown RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 BUB1O43683 1085 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 N4BP1O75113 896 aaKnown RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 TRIM37O94972 964 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 CASP14P31944 242 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 GBP5Q96PP8 586 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 CUEDC2Q9H467 287 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 TRAPPC10P48553 1259 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 USH1GQ495M9 461 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 C11orf57Q6ZUT1 292 aaPredicted RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 CCDC89Q8N998 374 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 CACTINQ8WUQ7 758 aaKnown RBP15.34■□□□□ 0.05
VTI1B-204ENST00000554659 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
VTI1B-204ENST00000554659 DDX39AO00148 427 aaKnown RBP15.33■□□□□ 0.05
VTI1B-204ENST00000554659 CIAO1O76071 339 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 PTGDRQ13258 359 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 PPP2R5DQ14738 602 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 ANKRD42Q8N9B4 389 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 PNMA1Q8ND90 353 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 MGARPQ8TDB4 240 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.05
VTI1B-204ENST00000554659 CCNL1Q9UK58 526 aaPredicted RBP15.33■□□□□ 0.05
VTI1B-204ENST00000554659 PHKG2P15735 406 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 SATB1Q01826 763 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 DIXDC1Q155Q3 683 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 SLFN12Q8IYM2 578 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 PANK4Q9NVE7 773 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 EEF1GP26641 437 aaKnown RBP15.33■□□□□ 0.04
VTI1B-204ENST00000554659 ATP1A2P50993 1020 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 CYP21A2P08686 494 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 MYCLP12524 364 aaPredicted RBP15.33■□□□□ 0.04
VTI1B-204ENST00000554659 ABCB4P21439 1286 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
VTI1B-204ENST00000554659 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
VTI1B-204ENST00000554659 LAD1O00515 517 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 GIPC1O14908 333 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 CFBP00751 764 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms