RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MRE11P49959 708 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 FCGRTP55899 365 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 COL19A1Q14993 1142 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 EAPPQ56P03 285 aaPredicted RBP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 ALG1LQ6GMV1 187 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 KIAA1211Q6ZU35 1233 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 AGGF1Q8N302 714 aaeCLIP7.27□□□□□ -1.25
VPS33B-203ENST00000554264 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 WNT8BQ93098 351 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
VPS33B-203ENST00000554264 BRCA1P38398 1863 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 GLTPD2A6NH11 291 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 FAM177BA6PVY3 158 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 MSTNO14793 375 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 DLGAP3O95886 979 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 IGHDP01880 384 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 IREB2P48200 963 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 NLRP12P59046 1061 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 PTPN12Q05209 780 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 C19orf57Q0VDD7 668 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 SUZ12Q15022 739 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 HSCBQ8IWL3 235 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 FTSJ3Q8IY81 847 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 CCDC146Q8IYE0 955 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 TMEM130Q8N3G9 435 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 C3orf58Q8NDZ4 430 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 UBE2Q2Q8WVN8 375 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 SNX21Q969T3 373 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 DUSP9Q99956 384 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 SSBP4Q9BWG4 385 aaPredicted RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 NRSN2Q9GZP1 204 aa7.26□□□□□ -1.25
VPS33B-203ENST00000554264 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 USP42Q9H9J4 1324 aaKnown RBP7.26□□□□□ -1.25
VPS33B-203ENST00000554264 IBTKQ9P2D0 1353 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 FSD2A1L4K1 749 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 F8W735 103 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 LMNB1P20700 586 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 CHRNA5P30532 468 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 GATA4P43694 442 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 CRKLP46109 303 aaKnown RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 ZNF157P51786 506 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 DDR1Q08345 913 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 ALDH1L2Q3SY69 923 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 PLEKHO1Q53GL0 409 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 TMCO4Q5TGY1 634 aa7.25□□□□□ -1.25
VPS33B-203ENST00000554264 DZIP1LQ8IYY4 767 aaKnown RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 KDM6AO15550 1401 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-203ENST00000554264 POLRMTO00411 1230 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 PRPF40AO75400 957 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 ECEL1O95672 775 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 B3GALT4O96024 378 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 CTSBP07858 339 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 TM4SF1P30408 202 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 MCM4P33991 863 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 ATP2B2Q01814 1243 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 GSTM4Q03013 218 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 DOC2BQ14184 412 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 AMOTQ4VCS5 1084 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 DTHD1Q6ZMT9 781 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 TXNRD3Q86VQ6 643 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 SMC5Q8IY18 1101 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 TRIM56Q9BRZ2 755 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 C22orf23Q9BZE7 217 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 SOX17Q9H6I2 414 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 POLKQ9UBT6 870 aa7.24□□□□□ -1.25
VPS33B-203ENST00000554264 SRP68Q9UHB9 627 aaKnown RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 COL5A3P25940 1745 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-203ENST00000554264 GOLGA6L22H0YM25 854 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 IGHA1P01876 353 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 EIF4A2Q14240 407 aaKnown RBP7.23□□□□□ -1.25
VPS33B-203ENST00000554264 DUOXA2Q1HG44 320 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 C1orf141Q5JVX7 400 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 ZNF530Q6P9A1 599 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-203ENST00000554264 TTLL6Q8N841 843 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 PANK1Q8TE04 598 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 ARHGAP45Q92619 1136 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 GCC1Q96CN9 775 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 MEGF10Q96KG7 1140 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 FAM161BQ96MY7 647 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 AKTIPQ9H8T0 292 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
VPS33B-203ENST00000554264 COL3A1P02461 1466 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-203ENST00000554264 GNA15P30679 374 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 ARL4DP49703 201 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 MTHFSP49914 203 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 MFAP1P55081 439 aaKnown RBP7.22□□□□□ -1.25
VPS33B-203ENST00000554264 RPS26P11Q5JNZ5 115 aaPredicted RBP7.22□□□□□ -1.25
VPS33B-203ENST00000554264 ATF7IPQ6VMQ6 1270 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 ACAD11Q709F0 780 aa7.22□□□□□ -1.25
VPS33B-203ENST00000554264 UBL7Q96S82 380 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms