RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 PCP11498 1178 aaKnown RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 SLC1A4P43007 532 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 CPXCR1Q8N123 301 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 U2AF1L4Q8WU68 220 aaKnown RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 ESR2Q92731 530 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHGA-203ENST00000553866 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 MROH8Q9H579 483 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 SLC38A10Q9HBR0 1119 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 ZSWIM5Q9P217 1185 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 CTNNA3Q9UI47 895 aa14.87□□□□□ -0.03
CHGA-203ENST00000553866 ISY1Q9ULR0 285 aaKnown RBP14.87□□□□□ -0.03
CHGA-203ENST00000553866 SGPL1O95470 568 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 SLC25A27O95847 323 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 PGK2P07205 417 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 TOP1P11387 765 aaKnown RBP14.86□□□□□ -0.03
CHGA-203ENST00000553866 TAL1P17542 331 aaPredicted RBP14.86□□□□□ -0.03
CHGA-203ENST00000553866 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
CHGA-203ENST00000553866 SLC16A2P36021 539 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 SLC4A3P48751 1232 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
CHGA-203ENST00000553866 CYB5R4Q7L1T6 521 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 TRPV1Q8NER1 839 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 ZNF536O15090 1300 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 FRMPD2Q68DX3 1309 aaPredicted RBP14.86□□□□□ -0.03
CHGA-203ENST00000553866 RPTORQ8N122 1335 aa14.86□□□□□ -0.03
CHGA-203ENST00000553866 STRNO43815 780 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 ZBED4O75132 1171 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 CYP2C19P33261 490 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 STAT2P52630 851 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 COL9A3Q14050 684 aaPredicted RBP14.85□□□□□ -0.03
CHGA-203ENST00000553866 BMP2KLQ5H9B9 411 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 PPP4R3BQ5MIZ7 849 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 STOX1Q6ZVD7 989 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 UBE2Q1Q7Z7E8 422 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 MAP4K1Q92918 833 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 ESYT1Q9BSJ8 1104 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 LSG1Q9H089 658 aaKnown RBP14.85□□□□□ -0.03
CHGA-203ENST00000553866 GPCPD1Q9NPB8 672 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
CHGA-203ENST00000553866 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 PDHBP11177 359 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 FCER1AP12319 257 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 IKQ13123 557 aaPredicted RBP14.84□□□□□ -0.03
CHGA-203ENST00000553866 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 FAM160B2Q86V87 743 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 TRMT44Q8IYL2 757 aaKnown RBP14.84□□□□□ -0.03
CHGA-203ENST00000553866 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 DCAF4Q8WV16 495 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 AGBL1Q96MI9 1066 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 TTC14Q96N46 770 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 MMP19Q99542 508 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 TEX13BQ9BXU2 312 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 HMX1Q9NP08 348 aaPredicted RBP14.84□□□□□ -0.03
CHGA-203ENST00000553866 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
CHGA-203ENST00000553866 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
CHGA-203ENST00000553866 PLA2G6O60733 806 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 TFRCP02786 760 aaKnown RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 PRAMEF19Q5SWL8 479 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 LHX8Q68G74 356 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 DGKHQ86XP1 1220 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 ENAHQ8N8S7 591 aaPredicted RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 DIS3LQ8TF46 1054 aaKnown RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 MAML3Q96JK9 1138 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 CPVLQ9H3G5 476 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 RBM8AQ9Y5S9 174 aaKnown RBP14.83□□□□□ -0.04
CHGA-203ENST00000553866 TNKSO95271 1327 aa14.83□□□□□ -0.04
CHGA-203ENST00000553866 E7EWF7 191 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 GOLGA8HP0CJ92 632 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 SEC23AQ15436 765 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 ZNF792Q3KQV3 632 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 BTNL9Q6UXG8 535 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 KRT23Q9C075 422 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 SENP2Q9HC62 589 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 HOMER2Q9NSB8 354 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 FRMPD3Q5JV73 1810 aa14.82□□□□□ -0.04
CHGA-203ENST00000553866 DNAJC25-GNG10A0A024R161 153 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 NEFLP07196 543 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 CYBAP13498 195 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 OAZ1P54368 228 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 ZNF543Q08ER8 600 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 MFSD14CQ5VZR4 134 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 OLFML2BQ68BL8 750 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 IQCA1Q86XH1 822 aa14.81□□□□□ -0.04
CHGA-203ENST00000553866 PNMA1Q8ND90 353 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms