RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 WASF1Q92558 559 aa16.22■□□□□ 0.19
ABCD4-219ENST00000553745 NUP88Q99567 741 aaPredicted RBP16.22■□□□□ 0.19
ABCD4-219ENST00000553745 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
ABCD4-219ENST00000553745 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
ABCD4-219ENST00000553745 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
ABCD4-219ENST00000553745 V9GY48 417 aaPredicted RBP16.22■□□□□ 0.19
ABCD4-219ENST00000553745 LIG1P18858 919 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 SLC1A4P43007 532 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 TPRNQ4KMQ1 711 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
ABCD4-219ENST00000553745 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 SPICE1Q8N0Z3 855 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 GMCL1Q96IK5 515 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 FEZ1Q99689 392 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
ABCD4-219ENST00000553745 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.18
ABCD4-219ENST00000553745 PTPRAP18433 802 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 NF2P35240 595 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 FBXO18Q8NFZ0 1043 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 SHISA4Q96DD7 197 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 VCPKMTQ9H867 229 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 PICK1Q9NRD5 415 aa16.21■□□□□ 0.18
ABCD4-219ENST00000553745 PARP14Q460N5 1801 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 TRAF5O00463 557 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 SLC16A2P36021 539 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 VGLL4Q14135 290 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
ABCD4-219ENST00000553745 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
ABCD4-219ENST00000553745 SCG2P13521 617 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 SMARCA1P28370 1054 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 IREB2P48200 963 aaKnown RBP16.19■□□□□ 0.18
ABCD4-219ENST00000553745 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
ABCD4-219ENST00000553745 DGKZQ13574 1117 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 PFKFB3Q16875 520 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-219ENST00000553745 KRT40Q6A162 431 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 MOB2Q70IA6 237 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 RIOX1Q9H6W3 641 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 RCOR1Q9UKL0 485 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 CFAP45Q9UL16 551 aa16.19■□□□□ 0.18
ABCD4-219ENST00000553745 BMP3P12645 472 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 MAP3K9P80192 1104 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 MTMR2Q13614 643 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 TRIM29Q14134 588 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 RBM43Q6ZSC3 357 aaKnown RBP16.18■□□□□ 0.18
ABCD4-219ENST00000553745 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.182e-6■■■■■ 39.1
ABCD4-219ENST00000553745 AS3MTQ9HBK9 375 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 TRPM7Q96QT4 1865 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 TTLL12Q14166 644 aaPredicted RBP16.18■□□□□ 0.18
ABCD4-219ENST00000553745 FAM83BQ5T0W9 1011 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 ADGRF4Q8IZF3 695 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
ABCD4-219ENST00000553745 PIGSQ96S52 555 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 WDR18Q9BV38 432 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 KIAA1683Q9H0B3 1180 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
ABCD4-219ENST00000553745 KCNJ14Q9UNX9 436 aa16.18■□□□□ 0.18
ABCD4-219ENST00000553745 USP17L10C9JJH3 530 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 SPP2Q13103 211 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 ZNF408Q9H9D4 720 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 JMJD4Q9H9V9 463 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 DDX19AQ9NUU7 478 aaKnown RBP16.17■□□□□ 0.18
ABCD4-219ENST00000553745 CSADQ9Y600 493 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 ZHX2Q9Y6X8 837 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 LOC285556D6RIA3 1793 aa16.17■□□□□ 0.18
ABCD4-219ENST00000553745 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 KIF28PB7ZC32 967 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 MMP1P03956 469 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-219ENST00000553745 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 WWC2Q6AWC2 1192 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 DACT1Q9NYF0 836 aa16.16■□□□□ 0.18
ABCD4-219ENST00000553745 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
ABCD4-219ENST00000553745 SEC63Q9UGP8 760 aaKnown RBP16.16■□□□□ 0.18
ABCD4-219ENST00000553745 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
ABCD4-219ENST00000553745 GOLGA6L4A6NEF3 574 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 XBP1P17861 261 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 IKQ13123 557 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-219ENST00000553745 TYW1BQ6NUM6 668 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 ANKRD13AQ8IZ07 590 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 CLMNQ96JQ2 1002 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 PHF20Q9BVI0 1012 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 STAT2P52630 851 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 BACE1P56817 501 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 SYDE2Q5VT97 1194 aa16.15■□□□□ 0.18
ABCD4-219ENST00000553745 BTNL9Q6UXG8 535 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms