RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ORC2Q13416 577 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-205ENST00000553474 SMAP1Q8IYB5 467 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-205ENST00000553474 TC2NQ8N9U0 490 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF397Q8NF99 534 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-205ENST00000553474 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 FAM163AQ96GL9 167 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-205ENST00000553474 IL17RBQ9NRM6 502 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-205ENST00000553474 M0R2N6 131 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 CYP2D6P10635 497 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 NPR1P16066 1061 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 AFMP43652 599 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 PDXDC2PQ6P474 469 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 SYT10Q6XYQ8 523 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 GRAMD1CQ8IYS0 662 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 ANKRD20A12PQ8NF67 263 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 NLGN2Q8NFZ4 835 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 MED15Q96RN5 788 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 SPZ1Q9BXG8 430 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 MAGEF1Q9HAY2 307 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 CD2APQ9Y5K6 639 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 FOCADQ5VW36 1801 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 KLRG2A4D1S0 409 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 LRRC10BA6NIK2 292 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 IL1R1P14778 569 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 APTXQ7Z2E3 356 aaKnown RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 TMC4Q7Z404 712 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 REXO1L1PQ8IX06 675 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 C4orf32Q8N8J7 132 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 BARHL2Q9NY43 387 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 ADD3Q9UEY8 706 aaKnown RBP14.61□□□□□ -0.07
SHMT2-205ENST00000553474 MAD2L2Q9UI95 211 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 RWDD2AQ9UIY3 292 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 PPP2R2CQ9Y2T4 447 aa14.61□□□□□ -0.07
SHMT2-205ENST00000553474 GPR75-ASB3A0A0A6YYF3 556 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 CCDC194A0A1B0GVG4 234 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 AKR1B15C9JRZ8 316 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 hCG_1984214I3L0E3 225 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 BBOX1O75936 387 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 PBX1P40424 430 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 TRIM14Q14142 442 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF658Q5TYW1 1059 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 TRIM65Q6PJ69 517 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 TRMT44Q8IYL2 757 aaKnown RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF713Q8N859 430 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 AK8Q96MA6 479 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 RTFDC1Q9BY42 306 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 OGFRQ9NZT2 677 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 SRCAPQ6ZRS2 3230 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 MYH1P12882 1939 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 WNT7AO00755 349 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 TPM1P09493 284 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 MCM7P33993 719 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 DTHD1Q6ZMT9 781 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 SLC51AQ86UW1 340 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 PPFIBP1Q86W92 1011 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 CCSER1Q9C0I3 900 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 DNAI1Q9UI46 699 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHMT2-205ENST00000553474 LRRC37AA6NMS7 1700 aa14.6□□□□□ -0.07
SHMT2-205ENST00000553474 TGFB2P61812 414 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 PAK1Q13153 545 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 KCNB1Q14721 858 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 STYK1Q6J9G0 422 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 ZMYND12Q9H0C1 365 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 CD209Q9NNX6 404 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 DISC1Q9NRI5 854 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 LIMA1Q9UHB6 759 aaKnown RBP14.59□□□□□ -0.07
SHMT2-205ENST00000553474 SUGT1Q9Y2Z0 365 aa14.59□□□□□ -0.07
SHMT2-205ENST00000553474 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-205ENST00000553474 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
SHMT2-205ENST00000553474 RASA1P20936 1047 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 FECHP22830 423 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 GNA11P29992 359 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 ALDH1B1P30837 517 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 HOXA10P31260 410 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-205ENST00000553474 PPP1R2P41236 205 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 NOVP48745 357 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 EVX2Q03828 476 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 KRT25Q7Z3Z0 450 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
SHMT2-205ENST00000553474 STXBP3O00186 592 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 CCDC175P0C221 793 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 HOXA7P31268 230 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-205ENST00000553474 STAT6P42226 847 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
SHMT2-205ENST00000553474 CNKSR1Q969H4 720 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms