RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 SCAND2PQ9GZW5 306 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-206ENST00000553447 BRMS1Q9HCU9 246 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 USP17L10C9JJH3 530 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 TRAK2O60296 914 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-206ENST00000553447 CALML3P27482 149 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 ZYXQ15942 572 aaKnown RBP20.24■□□□□ 0.83
PSEN1-206ENST00000553447 SKOR2Q2VWA4 1001 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-206ENST00000553447 TYW1BQ6NUM6 668 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 BTNL9Q6UXG8 535 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
PSEN1-206ENST00000553447 ZKSCAN4Q969J2 545 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-206ENST00000553447 CDCA5Q96FF9 252 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 USP28Q96RU2 1077 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 AS3MTQ9HBK9 375 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 PICK1Q9NRD5 415 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 ELP1O95163 1332 aa20.24■□□□□ 0.83
PSEN1-206ENST00000553447 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 TMEM232C9JQI7 657 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 PTPRAP18433 802 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 NR5A1Q13285 461 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 CCDC12Q8WUD4 166 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-206ENST00000553447 LEO1Q8WVC0 666 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-206ENST00000553447 SPATA32Q96LK8 384 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 KIAA1683Q9H0B3 1180 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 UTRNP46939 3433 aa20.23■□□□□ 0.83
PSEN1-206ENST00000553447 ZBTB5O15062 677 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 NAPAP54920 295 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 PRKG1Q13976 671 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 DAGLBQ8NCG7 672 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 TNFRSF25Q93038 417 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 PCDHA4Q9UN74 947 aa20.22■□□□□ 0.83
PSEN1-206ENST00000553447 PARP14Q460N5 1801 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 DCAF8L1A6NGE4 600 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 PPP1R12BO60237 982 aaPredicted RBP20.21■□□□□ 0.83
PSEN1-206ENST00000553447 NF2P35240 595 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 MAP3K9P80192 1104 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
PSEN1-206ENST00000553447 BLIDQ8IZY5 108 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 LPAR1Q92633 364 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 FTOQ9C0B1 505 aaKnown RBP eCLIP20.21■□□□□ 0.83
PSEN1-206ENST00000553447 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
PSEN1-206ENST00000553447 PTPRFP10586 1907 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 ESYT2A0FGR8 921 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 PLA2G6O60733 806 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-206ENST00000553447 GADD45BO75293 160 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-206ENST00000553447 STAT2P52630 851 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 CEBPZQ03701 1054 aaKnown RBP20.2■□□□□ 0.82
PSEN1-206ENST00000553447 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-206ENST00000553447 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 ZMYND12Q9H0C1 365 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 CLEC11AQ9Y240 323 aa20.2■□□□□ 0.82
PSEN1-206ENST00000553447 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
PSEN1-206ENST00000553447 ADAMTS3O15072 1205 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 WDR46O15213 610 aaKnown RBP20.19■□□□□ 0.82
PSEN1-206ENST00000553447 MBD3O95983 291 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
PSEN1-206ENST00000553447 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-206ENST00000553447 USP14P54578 494 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 UBE2HP62256 183 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 SPP2Q13103 211 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 MTMR2Q13614 643 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 KLHL40Q2TBA0 621 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 RILPL1Q5EBL4 403 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 ANO1Q5XXA6 986 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-206ENST00000553447 FAM160B2Q86V87 743 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 GPT2Q8TD30 523 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 CHURC1Q8WUH1 139 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 COA7Q96BR5 231 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 C6orf50Q9HD87 102 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 FEM1BQ9UK73 627 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 PRR12Q9ULL5 1215 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
PSEN1-206ENST00000553447 SMCO2A6NFE2 343 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 M0R2N6 131 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 YEATS4O95619 227 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 POTEIP0CG38 1075 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 POTEJP0CG39 1038 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 GNA11P29992 359 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 VGLL4Q14135 290 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
PSEN1-206ENST00000553447 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 EMILIN3Q9NT22 766 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 ZHX2Q9Y6X8 837 aa20.18■□□□□ 0.82
PSEN1-206ENST00000553447 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 TOB1P50616 345 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-206ENST00000553447 BACE1P56817 501 aa20.17■□□□□ 0.82
PSEN1-206ENST00000553447 STK38Q15208 465 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms