RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 RBM28Q9NW13 759 aaKnown RBP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 KCNH4Q9UQ05 1017 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 A0A0G2JLL6 359 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 GOLGA8AA7E2F4 631 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 PARP1P09874 1014 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 PDHBP11177 359 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 BMP3P12645 472 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 SLC1A4P43007 532 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 GTF2A2P52657 109 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 HMGCS2P54868 508 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 STK3Q13188 491 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 GRM4Q14833 912 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 DEFB115Q30KQ5 88 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 ASPRV1Q53RT3 343 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 CPLX2Q6PUV4 134 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 PRRT2Q7Z6L0 340 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 RASAL3Q86YV0 1011 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 FANCBQ8NB91 859 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-204ENST00000553335 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
TMEM260-204ENST00000553335 NID2Q14112 1375 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-204ENST00000553335 PFKFB2O60825 505 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 CD2BP2O95400 341 aaKnown RBP11.33□□□□□ -0.6
TMEM260-204ENST00000553335 NDUFB10O96000 172 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 SLC10A3P09131 477 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 CETPP11597 493 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 RXRAP19793 462 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 GNAQP50148 359 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
TMEM260-204ENST00000553335 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM260-204ENST00000553335 ME3Q16798 604 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 RTN1Q16799 776 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 CCDC96Q2M329 555 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 GADL1Q6ZQY3 521 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
TMEM260-204ENST00000553335 PALM3A6NDB9 673 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-204ENST00000553335 MANSC4A6NHS7 340 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-204ENST00000553335 RASSF10A6NK89 507 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 CPLX1O14810 134 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 VCAM1P19320 739 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 GJA5P36382 358 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 INHBEP58166 350 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 SPICE1Q8N0Z3 855 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 CHURC1Q8WUH1 139 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 TMX3Q96JJ7 454 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 MAD2L2Q9UI95 211 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
TMEM260-204ENST00000553335 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
TMEM260-204ENST00000553335 FRMPD2Q68DX3 1309 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-204ENST00000553335 CCL15-CCL14A0A0B4J2E2 113 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 PLA2G6O60733 806 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 CDKL5O76039 1030 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 LARGE1O95461 756 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 OSBPP22059 807 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 SMARCA1P28370 1054 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 STAT2P52630 851 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 SCRN1Q12765 414 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 IKQ13123 557 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-204ENST00000553335 DGKZQ13574 1117 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 CCL15Q16663 113 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 TANGO6Q9C0B7 1094 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 RPAP3Q9H6T3 665 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-204ENST00000553335 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
TMEM260-204ENST00000553335 COL11A1P12107 1806 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms