RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CTNNA3Q9UI47 895 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 TAF6LQ9Y6J9 622 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 ZNF536O15090 1300 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 RPTORQ8N122 1335 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 TOP1P11387 765 aaKnown RBP22.76■■□□□ 1.23
PTCH1-227ENST00000553256 MNX1P50219 401 aaPredicted RBP22.76■■□□□ 1.23
PTCH1-227ENST00000553256 BTNL9Q6UXG8 535 aa22.76■■□□□ 1.23
PTCH1-227ENST00000553256 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
PTCH1-227ENST00000553256 MAP4K1Q92918 833 aa22.76■■□□□ 1.23
PTCH1-227ENST00000553256 TEX13BQ9BXU2 312 aa22.76■■□□□ 1.23
PTCH1-227ENST00000553256 TMEM232C9JQI7 657 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 CYP21A2P08686 494 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 PRKAR2AP13861 404 aaKnown RBP22.75■■□□□ 1.23
PTCH1-227ENST00000553256 ZKSCAN1P17029 563 aaPredicted RBP22.75■■□□□ 1.23
PTCH1-227ENST00000553256 SLC1A4P43007 532 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 OAZ1P54368 228 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 PLS1Q14651 629 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 IMMTQ16891 758 aaKnown RBP22.75■■□□□ 1.23
PTCH1-227ENST00000553256 NCAPG2Q86XI2 1143 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 DGKHQ86XP1 1220 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 RUFY2Q8WXA3 655 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 ESR2Q92731 530 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 ZSWIM5Q9P217 1185 aa22.75■■□□□ 1.23
PTCH1-227ENST00000553256 KDM4AO75164 1064 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 STAT2P52630 851 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 WDR78Q5VTH9 848 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 OLFML2BQ68BL8 750 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 SAMD1Q6SPF0 538 aaPredicted RBP22.74■■□□□ 1.23
PTCH1-227ENST00000553256 KCTD1Q719H9 257 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 DCAF4Q8WV16 495 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 KIFC2Q96AC6 838 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 DEFB118Q96PH6 123 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 TOMM22Q9NS69 142 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 IVNS1ABPQ9Y6Y0 642 aa22.74■■□□□ 1.23
PTCH1-227ENST00000553256 B4E1Z4 1266 aa22.73■■□□□ 1.23
PTCH1-227ENST00000553256 PDHBP11177 359 aa22.73■■□□□ 1.23
PTCH1-227ENST00000553256 LHX8Q68G74 356 aa22.73■■□□□ 1.23
PTCH1-227ENST00000553256 FAM160B2Q86V87 743 aa22.73■■□□□ 1.23
PTCH1-227ENST00000553256 TRPV1Q8NER1 839 aa22.73■■□□□ 1.23
PTCH1-227ENST00000553256 LSG1Q9H089 658 aaKnown RBP22.73■■□□□ 1.23
PTCH1-227ENST00000553256 DNAJC25-GNG10A0A024R161 153 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 FDX1P10109 184 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 CAPN2P17655 700 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 CCND3P30281 292 aaPredicted RBP22.72■■□□□ 1.23
PTCH1-227ENST00000553256 COPB2P35606 906 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 ZNF792Q3KQV3 632 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 SNRNP48Q6IEG0 339 aaKnown RBP22.72■■□□□ 1.23
PTCH1-227ENST00000553256 TTBK2Q6IQ55 1244 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 STOX1Q6ZVD7 989 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 RAVER2Q9HCJ3 691 aaKnown RBP22.72■■□□□ 1.23
PTCH1-227ENST00000553256 HMX1Q9NP08 348 aaPredicted RBP22.72■■□□□ 1.23
PTCH1-227ENST00000553256 PRR12Q9ULL5 1215 aa22.72■■□□□ 1.23
PTCH1-227ENST00000553256 FCER1AP12319 257 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 SEC23AQ15436 765 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 ENAHQ8N8S7 591 aaPredicted RBP22.71■■□□□ 1.23
PTCH1-227ENST00000553256 CHURC1Q8WUH1 139 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 MAML3Q96JK9 1138 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 ESYT1Q9BSJ8 1104 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 OGDHLQ9ULD0 1010 aa22.71■■□□□ 1.23
PTCH1-227ENST00000553256 U3KPZ7 1027 aaPredicted RBP22.71■■□□□ 1.23
PTCH1-227ENST00000553256 ZBED4O75132 1171 aa22.7■■□□□ 1.22
PTCH1-227ENST00000553256 CYBAP13498 195 aa22.7■■□□□ 1.22
PTCH1-227ENST00000553256 CYP2C19P33261 490 aa22.7■■□□□ 1.22
PTCH1-227ENST00000553256 CYB5R4Q7L1T6 521 aa22.7■■□□□ 1.22
PTCH1-227ENST00000553256 FGD4Q96M96 766 aa22.7■■□□□ 1.22
PTCH1-227ENST00000553256 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.22
PTCH1-227ENST00000553256 RANBP17Q9H2T7 1088 aaKnown RBP22.7■■□□□ 1.22
PTCH1-227ENST00000553256 DIS3Q9Y2L1 958 aaKnown RBP22.7■■□□□ 1.22
PTCH1-227ENST00000553256 ZNFX1Q9P2E3 1918 aaKnown RBP22.69■■□□□ 1.22
PTCH1-227ENST00000553256 ZNF543Q08ER8 600 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 DPP9Q86TI2 863 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 CPXCR1Q8N123 301 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 CHMP4CQ96CF2 233 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 MMP19Q99542 508 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 KRT23Q9C075 422 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 CNNM2Q9H8M5 875 aa22.69■■□□□ 1.22
PTCH1-227ENST00000553256 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
PTCH1-227ENST00000553256 PGK2P07205 417 aa22.68■■□□□ 1.22
PTCH1-227ENST00000553256 COL9A3Q14050 684 aaPredicted RBP22.68■■□□□ 1.22
PTCH1-227ENST00000553256 AGBL1Q96MI9 1066 aa22.68■■□□□ 1.22
PTCH1-227ENST00000553256 TNKSO95271 1327 aa22.67■■□□□ 1.22
PTCH1-227ENST00000553256 CCDC178Q5BJE1 867 aa22.67■■□□□ 1.22
PTCH1-227ENST00000553256 MFSD14CQ5VZR4 134 aa22.67■■□□□ 1.22
PTCH1-227ENST00000553256 CHST13Q8NET6 341 aa22.67■■□□□ 1.22
PTCH1-227ENST00000553256 RBM8AQ9Y5S9 174 aaKnown RBP22.67■■□□□ 1.22
PTCH1-227ENST00000553256 E7EWF7 191 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 SLC16A2P36021 539 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 SNAP25P60880 206 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 KCTD2Q14681 263 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 NECTIN1Q15223 517 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 IQCA1Q86XH1 822 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 ANKLE1Q8NAG6 615 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 PNMA1Q8ND90 353 aa22.66■■□□□ 1.22
PTCH1-227ENST00000553256 FRMPD2Q68DX3 1309 aaPredicted RBP22.65■■□□□ 1.22
PTCH1-227ENST00000553256 FARP2O94887 1054 aaPredicted RBP22.65■■□□□ 1.22
PTCH1-227ENST00000553256 ANTXR2P58335 489 aa22.65■■□□□ 1.22
PTCH1-227ENST00000553256 SYDE2Q5VT97 1194 aa22.65■■□□□ 1.22
PTCH1-227ENST00000553256 MAMDC4Q6UXC1 1216 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms