RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SLC16A2P36021 539 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 ZNF165P49910 485 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 RASSF7Q02833 373 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 NPY5RQ15761 445 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GPATCH4Q5T3I0 446 aaKnown RBP9.44□□□□□ -0.9
RAB5B-210ENST00000553116 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 FER1L6Q2WGJ9 1857 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 A0A087WWV3 80 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 BECN2A8MW95 431 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GOLGA6L19H0YKK7 550 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 NFKBIEO00221 500 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 BIN1O00499 593 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 PTPREP23469 700 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GRIN1Q05586 938 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 ZNF543Q08ER8 600 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 PTGDRQ13258 359 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 SLFN13Q68D06 897 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GALNT17Q6IS24 598 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 LUZP1Q86V48 1076 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GMLQ99445 158 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 ANO10Q9NW15 660 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 HOOK1Q9UJC3 728 aaKnown RBP9.44□□□□□ -0.9
RAB5B-210ENST00000553116 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
RAB5B-210ENST00000553116 BRCA1P38398 1863 aaKnown RBP9.44□□□□□ -0.9
RAB5B-210ENST00000553116 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 TRAPPC10P48553 1259 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 NOVP48745 357 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 INF2Q27J81 1249 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 TTBK2Q6IQ55 1244 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 CSRNP2Q9H175 543 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 HERC5Q9UII4 1024 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 SRPRBQ9Y5M8 271 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 POLR2DO15514 142 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 CEP57L1Q8IYX8 460 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 FAM151AQ8WW52 585 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 TNFRSF25Q93038 417 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 COA7Q96BR5 231 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 TMEM39BQ9GZU3 492 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 MYOZ2Q9NPC6 264 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 WNT7AO00755 349 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 ADAMTS3O15072 1205 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 SMARCA1P28370 1054 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 TATDN1Q6P1N9 297 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 MIGA2Q7L4E1 593 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 ADGRF4Q8IZF3 695 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 REXO1Q8N1G1 1221 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 RASSF8Q8NHQ8 419 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.93e-9■■□□□ 13.3
RAB5B-210ENST00000553116 FERMT2Q96AC1 680 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 NAT10Q9H0A0 1025 aaKnown RBP9.43□□□□□ -0.9
RAB5B-210ENST00000553116 RIOX1Q9H6W3 641 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 NYAP2Q9P242 653 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 KIAA1468Q9P260 1216 aa9.43□□□□□ -0.9
RAB5B-210ENST00000553116 SHTN1A0MZ66 631 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 TNNI2P48788 182 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 ISM2Q6H9L7 571 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 NLGN2Q8NFZ4 835 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 PPP1R9BQ96SB3 815 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 ZMYND12Q9H0C1 365 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 GREB1LQ9C091 1923 aaPredicted RBP9.42□□□□□ -0.9
RAB5B-210ENST00000553116 WNT10BO00744 389 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 CAVIN2O95810 425 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 ADCY7P51828 1080 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
RAB5B-210ENST00000553116 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 TIGD1Q96MW7 591 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 ARHGEF10LQ9HCE6 1279 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 BIN2Q9UBW5 565 aaPredicted RBP9.42□□□□□ -0.9
RAB5B-210ENST00000553116 HPSEQ9Y251 543 aa9.42□□□□□ -0.9
RAB5B-210ENST00000553116 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 hCG_1984214I3L0E3 225 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 ADCY5O95622 1261 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 PDE4CQ08493 712 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 PNOCQ13519 176 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 LETM2Q2VYF4 491 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 SPICE1Q8N0Z3 855 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 ZNF713Q8N859 430 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 DAGLBQ8NCG7 672 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 DCAF4Q8WV16 495 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 DHX58Q96C10 678 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 JMJD4Q9H9V9 463 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 F5H6K3 240 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 TXLNAP40222 546 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 ATP2C1P98194 919 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 KLRC3Q07444 240 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 KRBA2Q6ZNG9 492 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms