RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
CBX5-205ENST00000552562 AGTPBP1Q9UPW5 1226 aa9.31□□□□□ -0.92
CBX5-205ENST00000552562 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
CBX5-205ENST00000552562 DOCK1Q14185 1865 aa9.31□□□□□ -0.92
CBX5-205ENST00000552562 TRPM7Q96QT4 1865 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 PDHXO00330 501 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
CBX5-205ENST00000552562 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
CBX5-205ENST00000552562 PDHBP11177 359 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 BMP3P12645 472 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 TROAPQ12815 778 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 TTBK2Q6IQ55 1244 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 SYNE3Q6ZMZ3 975 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 SGMS1Q86VZ5 419 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 MICU3Q86XE3 530 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 TMTC2Q8N394 836 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
CBX5-205ENST00000552562 DCAF4Q8WV16 495 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 AGXT2Q9BYV1 514 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 CPVLQ9H3G5 476 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
CBX5-205ENST00000552562 GOLGA8BA8MQT2 603 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 TMEM232C9JQI7 657 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 ZBTB43O43298 467 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 FLOT1O75955 427 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 DDAH1O94760 285 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 PARP1P09874 1014 aaKnown RBP9.29□□□□□ -0.92
CBX5-205ENST00000552562 SNHG28P0DPA3 235 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 CYP2C8P10632 490 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 SLC16A2P36021 539 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 MAP2K2P36507 400 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 TM4SF4P48230 202 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 INHBEP58166 350 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 IKQ13123 557 aaPredicted RBP9.29□□□□□ -0.92
CBX5-205ENST00000552562 STK3Q13188 491 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 GRM4Q14833 912 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 CATSPERGQ6ZRH7 1159 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 ANKRD23Q86SG2 305 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 FBXL16Q8N461 479 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 DNAJC5GQ8N7S2 189 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
CBX5-205ENST00000552562 TPCN1Q9ULQ1 816 aa9.29□□□□□ -0.92
CBX5-205ENST00000552562 GREB1LQ9C091 1923 aaPredicted RBP9.29□□□□□ -0.92
CBX5-205ENST00000552562 GOLGA8AA7E2F4 631 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 PEX10O60683 326 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 LARGE1O95461 756 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 OSBPP22059 807 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 PDIA3P30101 505 aaKnown RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 HOXA7P31268 230 aaPredicted RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 METAP2P50579 478 aaKnown RBP eCLIP9.28□□□□□ -0.92
CBX5-205ENST00000552562 SNAP25P60880 206 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 CCT2P78371 535 aaKnown RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
CBX5-205ENST00000552562 ANKRD1Q15327 319 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 ASPRV1Q53RT3 343 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 FANCBQ8NB91 859 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 CTCFLQ8NI51 663 aaPredicted RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
CBX5-205ENST00000552562 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 P2RX7Q99572 595 aaKnown RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
CBX5-205ENST00000552562 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
CBX5-205ENST00000552562 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
CBX5-205ENST00000552562 KLRF2D3W0D1 207 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 DHX16O60231 1041 aaKnown RBP9.27□□□□□ -0.93
CBX5-205ENST00000552562 DTNBO60941 627 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 PPFIA3O75145 1194 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 PLEKHA8P1O95397 391 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 CALM1P0DP23 149 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 CALM2P0DP24 149 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 CALM3P0DP25 149 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 CDC27P30260 824 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 STAT2P52630 851 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 EVCP57679 992 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 COG2Q14746 738 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 ME3Q16798 604 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 RTN1Q16799 776 aa9.27□□□□□ -0.93
CBX5-205ENST00000552562 GPATCH4Q5T3I0 446 aaKnown RBP9.27□□□□□ -0.93
CBX5-205ENST00000552562 OTUD7BQ6GQQ9 843 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms