RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 GJB4Q9NTQ9 266 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 WBP1LQ9NX94 342 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 HACL1Q9UJ83 578 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 STXBP3O00186 592 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 CTNND1O60716 968 aaKnown RBP14.41□□□□□ -0.1
CACNB3-217ENST00000550483 PLA2G6O60733 806 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 GDF11O95390 407 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 TBC1D10BQ4KMP7 808 aaPredicted RBP14.41□□□□□ -0.1
CACNB3-217ENST00000550483 HEATR3Q7Z4Q2 680 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 MTMR8Q96EF0 704 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 DEFB129Q9H1M3 183 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 ADARB2Q9NS39 739 aaKnown RBP14.41□□□□□ -0.1
CACNB3-217ENST00000550483 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 MYH6P13533 1939 aa14.41□□□□□ -0.1
CACNB3-217ENST00000550483 TRIM75PA6NK02 468 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 FAM196BA6NMK8 535 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 F5H6K3 240 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 CTAGE5O15320 804 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 GOLGA8HP0CJ92 632 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 BMP3P12645 472 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 NAPAP54920 295 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 KLRC3Q07444 240 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 BTNL9Q6UXG8 535 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 SAMD7Q7Z3H4 446 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 KRT25Q7Z3Z0 450 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 MRPS27Q92552 414 aaKnown RBP14.4□□□□□ -0.1
CACNB3-217ENST00000550483 TNFRSF25Q93038 417 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 ZNF341Q9BYN7 854 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 GZF1Q9H116 711 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-217ENST00000550483 MTMR7Q9Y216 660 aa14.4□□□□□ -0.1
CACNB3-217ENST00000550483 CCDC194A0A1B0GVG4 234 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 UBE2Q2LH0YL09 131 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 ZBTB5O15062 677 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 CUTAO60888 179 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 NDUFB10O96000 172 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
CACNB3-217ENST00000550483 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 PTPAQ15257 358 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 NPY5RQ15761 445 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
CACNB3-217ENST00000550483 LPAR1Q92633 364 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 PGBD1Q96JS3 809 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 NUP62CLQ9H1M0 184 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 PCDHA7Q9UN72 937 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 FRMPD2Q68DX3 1309 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-217ENST00000550483 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
CACNB3-217ENST00000550483 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 CCDC85CA6NKD9 419 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 LAD1O00515 517 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 CMA1P23946 247 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 MRE11P49959 708 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 CEBPZQ03701 1054 aaKnown RBP14.38□□□□□ -0.11
CACNB3-217ENST00000550483 NR5A1Q13285 461 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 SIAH1Q8IUQ4 282 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
CACNB3-217ENST00000550483 CHURC1Q8WUH1 139 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 FERMT2Q96AC1 680 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-217ENST00000550483 PIGSQ96S52 555 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
CACNB3-217ENST00000550483 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 GPCPD1Q9NPB8 672 aa14.38□□□□□ -0.11
CACNB3-217ENST00000550483 TCHHQ07283 1943 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 FAM237AA0A1B0GTK4 181 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 M0R2N6 131 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 TNRC18O15417 2968 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 KINO60870 393 aaKnown RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 ITGBL1O95965 494 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 ADCY7P51828 1080 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 USP14P54578 494 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 TTC38Q5R3I4 469 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 CLEC10AQ8IUN9 316 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 PYM1Q9BRP8 204 aaKnown RBP14.37□□□□□ -0.11
CACNB3-217ENST00000550483 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
CACNB3-217ENST00000550483 ZNF112Q9UJU3 913 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms