RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CCAR1Q8IX12 1150 aaKnown RBP26.38■■□□□ 1.81
BRF1-216ENST00000550208 TMEM87BQ96K49 555 aa26.38■■□□□ 1.81
BRF1-216ENST00000550208 LY9Q9HBG7 655 aa26.38■■□□□ 1.81
BRF1-216ENST00000550208 SRRDQ9UH36 339 aa26.38■■□□□ 1.81
BRF1-216ENST00000550208 GABRQQ9UN88 632 aa26.38■■□□□ 1.81
BRF1-216ENST00000550208 MGAMO43451 1857 aa26.38■■□□□ 1.81
BRF1-216ENST00000550208 SH2B2O14492 632 aaPredicted RBP26.37■■□□□ 1.81
BRF1-216ENST00000550208 CPA1P15085 419 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 SNAP25P60880 206 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 C8orf34Q49A92 452 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 TNS4Q8IZW8 715 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 COA7Q96BR5 231 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 TCEANC2Q96MN5 208 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 JAKMIP1Q96N16 626 aaKnown RBP26.37■■□□□ 1.81
BRF1-216ENST00000550208 SLC38A10Q9HBR0 1119 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 PRR12Q9ULL5 1215 aa26.37■■□□□ 1.81
BRF1-216ENST00000550208 DOCK3Q8IZD9 2030 aa26.36■■□□□ 1.81
BRF1-216ENST00000550208 MAPK4P31152 587 aa26.36■■□□□ 1.81
BRF1-216ENST00000550208 STAT3P40763 770 aa26.36■■□□□ 1.81
BRF1-216ENST00000550208 FBXO46Q6PJ61 603 aaPredicted RBP26.36■■□□□ 1.81
BRF1-216ENST00000550208 CPXCR1Q8N123 301 aa26.36■■□□□ 1.81
BRF1-216ENST00000550208 ZNF214Q9UL59 606 aaPredicted RBP26.36■■□□□ 1.81
BRF1-216ENST00000550208 CTDP1Q9Y5B0 961 aaPredicted RBP26.36■■□□□ 1.81
BRF1-216ENST00000550208 PRKCZQ05513 592 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 SYDE2Q5VT97 1194 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 WDR78Q5VTH9 848 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 GPR142Q7Z601 462 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 PLEKHH3Q7Z736 793 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 UBA5Q9GZZ9 404 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 RAVER2Q9HCJ3 691 aaKnown RBP26.35■■□□□ 1.81
BRF1-216ENST00000550208 GJD2Q9UKL4 321 aa26.35■■□□□ 1.81
BRF1-216ENST00000550208 COL11A1P12107 1806 aaPredicted RBP26.35■■□□□ 1.81
BRF1-216ENST00000550208 A0A0G2JMZ2 1700 aa26.34■■□□□ 1.81
BRF1-216ENST00000550208 HMGB1P09429 215 aaKnown RBP26.34■■□□□ 1.81
BRF1-216ENST00000550208 PARP1P09874 1014 aaKnown RBP26.34■■□□□ 1.81
BRF1-216ENST00000550208 ERCC3P19447 782 aa26.34■■□□□ 1.81
BRF1-216ENST00000550208 GPATCH4Q5T3I0 446 aaKnown RBP26.34■■□□□ 1.81
BRF1-216ENST00000550208 TMTC2Q8N394 836 aa26.34■■□□□ 1.81
BRF1-216ENST00000550208 CPVLQ9H3G5 476 aa26.34■■□□□ 1.81
BRF1-216ENST00000550208 PTCH2Q9Y6C5 1203 aa26.34■■□□□ 1.81
BRF1-216ENST00000550208 EIF5BO60841 1220 aaKnown RBP26.33■■□□□ 1.81
BRF1-216ENST00000550208 FDX1P10109 184 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 LIFRP42702 1097 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 SLC4A3P48751 1232 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 FLT3LGP49771 235 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 PRMT2P55345 433 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 TROAPQ12815 778 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 CATIPQ7Z7H3 387 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 NCAPG2Q86XI2 1143 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 RIOX2Q8IUF8 465 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 STAG2Q8N3U4 1231 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 SHCBP1Q8NEM2 672 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 CWC22Q9HCG8 908 aaKnown RBP26.33■■□□□ 1.81
BRF1-216ENST00000550208 WDR19Q8NEZ3 1342 aa26.33■■□□□ 1.81
BRF1-216ENST00000550208 ASPRV1Q53RT3 343 aa26.32■■□□□ 1.8
BRF1-216ENST00000550208 SNRNP48Q6IEG0 339 aaKnown RBP26.32■■□□□ 1.8
BRF1-216ENST00000550208 CCDC174Q6PII3 467 aa26.32■■□□□ 1.8
BRF1-216ENST00000550208 BLOC1S2Q6QNY1 142 aa26.32■■□□□ 1.8
BRF1-216ENST00000550208 RIPK3Q9Y572 518 aa26.32■■□□□ 1.8
BRF1-216ENST00000550208 PALM3A6NDB9 673 aaPredicted RBP26.31■■□□□ 1.8
BRF1-216ENST00000550208 CCDC69A6NI79 296 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 ATP2A1O14983 1001 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 SLC25A27O95847 323 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 PTPREP23469 700 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 PSMA5P28066 241 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 GRM4Q14833 912 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 ZNF654Q8IZM8 581 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 NUP133Q8WUM0 1156 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 MYL10Q9BUA6 226 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 TEX13BQ9BXU2 312 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 MROH8Q9H579 483 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 MAD2L2Q9UI95 211 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 ZNF536O15090 1300 aa26.31■■□□□ 1.8
BRF1-216ENST00000550208 CASTP20810 708 aaKnown RBP26.3■■□□□ 1.8
BRF1-216ENST00000550208 MORN1Q5T089 497 aa26.3■■□□□ 1.8
BRF1-216ENST00000550208 RAET1EQ8TD07 263 aa26.3■■□□□ 1.8
BRF1-216ENST00000550208 AGBL1Q96MI9 1066 aa26.3■■□□□ 1.8
BRF1-216ENST00000550208 RANBP17Q9H2T7 1088 aaKnown RBP26.3■■□□□ 1.8
BRF1-216ENST00000550208 HPS5Q9UPZ3 1129 aa26.3■■□□□ 1.8
BRF1-216ENST00000550208 RPS6KB1P23443 525 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 OAZ1P54368 228 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 Q6ZUG5 572 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 SGMS1Q86VZ5 419 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 NUDT12Q9BQG2 462 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 ZSWIM6Q9HCJ5 1215 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 VAT1LQ9HCJ6 419 aa26.29■■□□□ 1.8
BRF1-216ENST00000550208 SLC15A5A6NIM6 579 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 KLRF2D3W0D1 207 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 CYP2B6P20813 491 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 RAB11FIP4Q86YS3 637 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 ADGRF4Q8IZF3 695 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 USP6NLQ92738 828 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 IVNS1ABPQ9Y6Y0 642 aa26.28■■□□□ 1.8
BRF1-216ENST00000550208 STRNO43815 780 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 DDAH1O94760 285 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 IRF5Q13568 498 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 ABHD8Q96I13 439 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 TM6SF1Q9BZW5 370 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 BRPF3Q9ULD4 1205 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms