RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 IVLP07476 585 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 IFNAR1P17181 557 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 XBP1P17861 261 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 TTF1Q15361 905 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 ABHD10Q9NUJ1 306 aa12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 GNL3LQ9NVN8 582 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
SMARCC2-208ENST00000550150 EIF3CLB5ME19 914 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 ZNF185O15231 689 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 EIF3CQ99613 913 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 NACAP1Q9BZK3 213 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 IPO7O95373 1038 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 IBSPP21815 317 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 PTGDRQ13258 359 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CUL4BQ13620 913 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 E2F4Q16254 413 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 PIK3AP1Q6ZUJ8 805 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 ZPR1O75312 459 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 ATP1A1P05023 1023 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 RFC4P35249 363 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CYP27A1Q02318 531 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 DDR1Q08345 913 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 NELFBQ8WX92 580 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
SMARCC2-208ENST00000550150 KCNJ18B7U540 433 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 MYO1BO43795 1136 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 SARSP49591 514 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 KCNJ12Q14500 433 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 TMTC1Q8IUR5 882 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 KRT23Q9C075 422 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 TRIM21P19474 475 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 TM4SF1P30408 202 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 KRT2P35908 639 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 GPATCH11Q8N954 259 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 SPATA5Q8NB90 893 aa12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 FOXP1Q9H334 677 aaPredicted RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 EPN1Q9Y6I3 576 aaPredicted RBP12.08□□□□□ -0.48
SMARCC2-208ENST00000550150 TNKSO95271 1327 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 KLRK1P26718 216 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 BCAMP50895 628 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 PAK1Q13153 545 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 TRIML1Q8N9V2 468 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 LIG3P49916 1009 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 NAP1L1P55209 391 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 NLRP5P59047 1200 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 C2orf54Q08AI8 447 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 LRRC31Q6UY01 552 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM71BQ8TC56 605 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 EHD4Q9H223 541 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 BRMS1Q9HCU9 246 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 DUSP10Q9Y6W6 482 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 PDE8BO95263 885 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 CXCR5P32302 372 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 GGCXP38435 758 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 CCT5P48643 541 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 PPARAQ07869 468 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 STIM1Q13586 685 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 SLC27A3Q5K4L6 730 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 SGMS1Q86VZ5 419 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 LUC7L2Q9Y383 392 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 SAR1BQ9Y6B6 198 aa12.07□□□□□ -0.48
SMARCC2-208ENST00000550150 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms