RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
PTCH1-217ENST00000548420 TINF2Q9BSI4 451 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 HIPK3Q9H422 1215 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
PTCH1-217ENST00000548420 GINM1Q9NU53 330 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 A0A0U1RQG5 324 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-217ENST00000548420 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 ADCY6O43306 1168 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 GH2P01242 217 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 PGK2P07205 417 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 ABRAQ8N0Z2 381 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-217ENST00000548420 SCLYQ96I15 445 aa17.07■□□□□ 0.32
PTCH1-217ENST00000548420 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
PTCH1-217ENST00000548420 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
PTCH1-217ENST00000548420 ZP2Q05996 745 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 TFCP2Q12800 502 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 FEZ1Q99689 392 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
PTCH1-217ENST00000548420 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
PTCH1-217ENST00000548420 TLR3O15455 904 aaKnown RBP17.05■□□□□ 0.32
PTCH1-217ENST00000548420 CST5P28325 142 aaPredicted RBP17.05■□□□□ 0.32
PTCH1-217ENST00000548420 TIMM10P62072 90 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 ZNF792Q3KQV3 632 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 CEP85Q6P2H3 762 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
PTCH1-217ENST00000548420 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
PTCH1-217ENST00000548420 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 DDX19BQ9UMR2 479 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
PTCH1-217ENST00000548420 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 CTAGE5O15320 804 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
PTCH1-217ENST00000548420 IRS1P35568 1242 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTCH1-217ENST00000548420 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
PTCH1-217ENST00000548420 MROH8Q9H579 483 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 PTPRSQ13332 1948 aa17.04■□□□□ 0.32
PTCH1-217ENST00000548420 TPRP12270 2363 aaKnown RBP17.03■□□□□ 0.32
PTCH1-217ENST00000548420 ZNF536O15090 1300 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
PTCH1-217ENST00000548420 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 NEK9Q8TD19 979 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 MUTYHQ9UIF7 546 aa17.03■□□□□ 0.32
PTCH1-217ENST00000548420 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 MED19A0JLT2 244 aaPredicted RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 LCHNA4D1U4 455 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 H3BQ06 376 aaPredicted RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 C6orf222P0C671 652 aaPredicted RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 FCER1AP12319 257 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 USP14P54578 494 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 COG2Q14746 738 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 BMP8AQ7Z5Y6 402 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.32
PTCH1-217ENST00000548420 TRPV6Q9H1D0 765 aa17.02■□□□□ 0.32
PTCH1-217ENST00000548420 PDS5AQ29RF7 1337 aaKnown RBP17.01■□□□□ 0.31
PTCH1-217ENST00000548420 NCOR2Q9Y618 2525 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 DUSP11O75319 330 aaKnown RBP17.01■□□□□ 0.31
PTCH1-217ENST00000548420 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
PTCH1-217ENST00000548420 PLS1Q14651 629 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 RPAP2Q8IXW5 612 aaPredicted RBP17.01■□□□□ 0.31
PTCH1-217ENST00000548420 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
PTCH1-217ENST00000548420 SUGCTQ9HAC7 445 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 GVINP1Q7Z2Y8 2422 aa17.01■□□□□ 0.31
PTCH1-217ENST00000548420 DMDP11532 3685 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 ID4P47928 161 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
PTCH1-217ENST00000548420 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
PTCH1-217ENST00000548420 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
PTCH1-217ENST00000548420 UPF3AQ9H1J1 476 aaKnown RBP17■□□□□ 0.31
PTCH1-217ENST00000548420 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms