RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 HIRAP54198 1017 aaPredicted RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 ACER1Q8TDN7 264 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 GMCL1Q96IK5 515 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 SEC63Q9UGP8 760 aaKnown RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 WNT7AO00755 349 aa15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 MARCKSP29966 332 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 ECE1P42892 770 aa15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 ANGEL2Q5VTE6 544 aaKnown RBP15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 ENGASEQ8NFI3 743 aa15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 ZMYND12Q9H0C1 365 aa15.63■□□□□ 0.09
SMPDL3B-205ENST00000548116 USP17L10C9JJH3 530 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 PPP1R11O60927 126 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 SNW1Q13573 536 aaKnown RBP15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 GALNT17Q6IS24 598 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 LRSAM1Q6UWE0 723 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 ATAD5Q96QE3 1844 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 PNMA6FA0A0J9YX94 578 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 RAD21O60216 631 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 NAPAP54920 295 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 PIK3AP1Q6ZUJ8 805 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 FSIP1Q8NA03 581 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 RASGRP4Q8TDF6 673 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 NUP88Q99567 741 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 ARHGEF10LQ9HCE6 1279 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 PCDHA6Q9UN73 950 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 PCDHA8Q9Y5H6 950 aa15.62■□□□□ 0.09
SMPDL3B-205ENST00000548116 hCG_1984214I3L0E3 225 aa15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 ATP2B1P20020 1258 aa15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 ZNF713Q8N859 430 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 MRPS27Q92552 414 aaKnown RBP15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 COA7Q96BR5 231 aa15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 DDX19AQ9NUU7 478 aaKnown RBP15.61■□□□□ 0.09
SMPDL3B-205ENST00000548116 ESYT2A0FGR8 921 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 SMCO2A6NFE2 343 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 TRIM75PA6NK02 468 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 CCDC12Q8WUD4 166 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 CLSTN2Q9H4D0 955 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 MORC2Q9Y6X9 1032 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 ZBTB5O15062 677 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 LETM1O95202 739 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 ASNSP08243 561 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 BMP3P12645 472 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 CMA1P23946 247 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 FAM160A1Q05DH4 1040 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 BTNL9Q6UXG8 535 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 CCDC84Q86UT8 332 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 FMR1NBQ8N0W7 255 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 GLIS2Q9BZE0 524 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 NUP62CLQ9H1M0 184 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 FBXO2Q9UK22 296 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 NOL7Q9UMY1 257 aaKnown RBP15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 MRVI1Q9Y6F6 885 aa15.6■□□□□ 0.09
SMPDL3B-205ENST00000548116 A0A1B0GVL5 298 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 CUTAO60888 179 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 PTPREP23469 700 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 TRAPPC10P48553 1259 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 NDUFA8P51970 172 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 TTC38Q5R3I4 469 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 CCDC73Q6ZRK6 1079 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 SPICE1Q8N0Z3 855 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 POLR2AP24928 1970 aaKnown RBP15.59■□□□□ 0.09
SMPDL3B-205ENST00000548116 TMEM232C9JQI7 657 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 GNA11P29992 359 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 GRIN1Q05586 938 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 CAMK4Q16566 473 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 QRICH1Q2TAL8 776 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 PRAMEF18Q5VWM3 479 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 RBM43Q6ZSC3 357 aaKnown RBP15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 KRI1Q8N9T8 703 aaKnown RBP15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 FUCA2Q9BTY2 467 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 CEP131Q9UPN4 1083 aa15.58■□□□□ 0.09
SMPDL3B-205ENST00000548116 FAM237AA0A1B0GTK4 181 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 CTNND1O60716 968 aaKnown RBP15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 ZNF174Q15697 407 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 RESP18Q5W5W9 173 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 VCPKMTQ9H867 229 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 GRPEL1Q9HAV7 217 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 GOPCQ9HD26 462 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 ZNF112Q9UJU3 913 aa15.58■□□□□ 0.08
SMPDL3B-205ENST00000548116 PFKFB1P16118 471 aa15.57■□□□□ 0.08
SMPDL3B-205ENST00000548116 INPP5BP32019 993 aa15.57■□□□□ 0.08
SMPDL3B-205ENST00000548116 CDC37Q16543 378 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3B-205ENST00000548116 SYDE2Q5VT97 1194 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms