RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 SYT1P21579 422 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 SNAP25P60880 206 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 WDR18Q9BV38 432 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 FBXO28Q9NVF7 368 aa12.78□□□□□ -0.36
SCN8A-205ENST00000548086 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
SCN8A-205ENST00000548086 BMP3P12645 472 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 GJA5P36382 358 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 BACE1P56817 501 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
SCN8A-205ENST00000548086 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SCN8A-205ENST00000548086 PPP2R5BQ15173 497 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 PKN1Q16512 942 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
SCN8A-205ENST00000548086 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 AS3MTQ9HBK9 375 aa12.77□□□□□ -0.37
SCN8A-205ENST00000548086 TCHHQ07283 1943 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 VCAM1P19320 739 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 PIGSQ96S52 555 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 ALG1Q9BT22 464 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-205ENST00000548086 GNAQP50148 359 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 C2orf69Q8N8R5 385 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
SCN8A-205ENST00000548086 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
SCN8A-205ENST00000548086 AKAP17AQ02040 695 aaKnown RBP12.75□□□□□ -0.37
SCN8A-205ENST00000548086 ANP32BQ92688 251 aaKnown RBP12.75□□□□□ -0.37
SCN8A-205ENST00000548086 SLC10A4Q96EP9 437 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-205ENST00000548086 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
SCN8A-205ENST00000548086 STX6O43752 255 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 DEXIO95424 95 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 HUNKP57058 714 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 PPATQ06203 517 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 KCNJ14Q9UNX9 436 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 SYCE3A1L190 88 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 STAT2P52630 851 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 USP14P54578 494 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-205ENST00000548086 LPAR1Q92633 364 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 LZTS2Q9BRK4 669 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
SCN8A-205ENST00000548086 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 WDR46O15213 610 aaKnown RBP12.73□□□□□ -0.37
SCN8A-205ENST00000548086 ZNF500O60304 480 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-205ENST00000548086 TOMM70O94826 608 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 SCG2P13521 617 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 FKBP1BP68106 108 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 PPIL2Q13356 520 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-205ENST00000548086 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 RRP36Q96EU6 259 aaKnown RBP12.73□□□□□ -0.37
SCN8A-205ENST00000548086 PARP14Q460N5 1801 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 SMCHD1A6NHR9 2005 aa12.73□□□□□ -0.37
SCN8A-205ENST00000548086 C19orf81C9J6K1 198 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 H3BQV1 296 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-205ENST00000548086 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 KRT40Q6A162 431 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 COA7Q96BR5 231 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 WNK4Q96J92 1243 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
SCN8A-205ENST00000548086 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms