RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 KRT31Q15323 416 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 SPATA1Q5VX52 437 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
TMTC2-202ENST00000546590 SARM1Q6SZW1 724 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 SMCR8Q8TEV9 937 aaPredicted RBP9.47□□□□□ -0.89
TMTC2-202ENST00000546590 CTAGE1Q96RT6 745 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
TMTC2-202ENST00000546590 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 TAL1P17542 331 aaPredicted RBP9.47□□□□□ -0.89
TMTC2-202ENST00000546590 UBE4AQ14139 1066 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 KRT79Q5XKE5 535 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 RRAGAQ7L523 313 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 ANKRD2Q9GZV1 360 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
TMTC2-202ENST00000546590 A0A087X0B3 334 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 ERVV-1B6SEH8 477 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 GDF11O95390 407 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 COPB1P53618 953 aaKnown RBP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 NTRK3Q16288 839 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 CNGA4Q8IV77 575 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 TBCKQ8TEA7 893 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 CHP1Q99653 195 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 RSPH14Q9UHP6 348 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 CCDC66A2RUB6 948 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 FCER1AP12319 257 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 BMP6P22004 513 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 PRCPP42785 496 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 KLK7P49862 253 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 FXR1P51114 621 aaKnown RBP eCLIP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 TMTC3Q6ZXV5 915 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.89
TMTC2-202ENST00000546590 RMND1Q9NWS8 449 aa9.46□□□□□ -0.89
TMTC2-202ENST00000546590 CAPN2P17655 700 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 PLCG1P19174 1290 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 NCAPHQ15003 741 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 GRIK5Q16478 980 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 HERC4Q5GLZ8 1057 aaPredicted RBP9.46□□□□□ -0.9
TMTC2-202ENST00000546590 REREQ9P2R6 1566 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 IKBKBO14920 756 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 CDC25BP30305 580 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 KIF5AQ12840 1032 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
TMTC2-202ENST00000546590 SLC30A10Q6XR72 485 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 ADAT2Q7Z6V5 191 aaKnown RBP9.46□□□□□ -0.9
TMTC2-202ENST00000546590 SPAG5Q96R06 1193 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 TMEM60Q9H2L4 133 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 USP40Q9NVE5 1235 aa9.46□□□□□ -0.9
TMTC2-202ENST00000546590 MST1RQ04912 1400 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 ATP2C2O75185 946 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 CALCRLQ16602 461 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMTC2-202ENST00000546590 FERMT2Q96AC1 680 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 PARD6BQ9BYG5 372 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 VGLL3A8MV65 326 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 NTSR2O95665 410 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 SGMS1Q86VZ5 419 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
TMTC2-202ENST00000546590 NSUN4Q96CB9 384 aaKnown RBP9.45□□□□□ -0.9
TMTC2-202ENST00000546590 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 FEZ1Q99689 392 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 NAPGQ99747 312 aaPredicted RBP9.45□□□□□ -0.9
TMTC2-202ENST00000546590 TRIM31Q9BZY9 425 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 PDE11AQ9HCR9 933 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
TMTC2-202ENST00000546590 SMARCAL1Q9NZC9 954 aa9.45□□□□□ -0.9
TMTC2-202ENST00000546590 SMIM23A6NLE4 172 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 SFI1A8K8P3 1242 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 TOM1O60784 492 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 EIF3JO75822 258 aaKnown RBP9.44□□□□□ -0.9
TMTC2-202ENST00000546590 BMP15O95972 392 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 SMC1AQ14683 1233 aaKnown RBP9.44□□□□□ -0.9
TMTC2-202ENST00000546590 RAD9BQ6WBX8 426 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 JAKMIP2Q96AA8 810 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 MAP3K14Q99558 947 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 TSG101Q99816 390 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 TCRBV5S4A2TA0A5A2 114 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 ADAMTS3O15072 1205 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 GNA11P29992 359 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 SLC1A4P43007 532 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 GNAQP50148 359 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 GSTO1P78417 241 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 AMPD3Q01432 767 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
TMTC2-202ENST00000546590 ODF2Q5BJF6 829 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 DNAAF5Q86Y56 855 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 WDR66Q8TBY9 1149 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
TMTC2-202ENST00000546590 CDHR2Q9BYE9 1310 aa9.44□□□□□ -0.9
TMTC2-202ENST00000546590 ARHGAP23Q9P227 1491 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms