RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
LTBR-214ENST00000545445 ZSWIM6Q9HCJ5 1215 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 CYP46A1Q9Y6A2 500 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
LTBR-214ENST00000545445 MYH8P13535 1937 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 IFIT3O14879 490 aaKnown RBP13.88□□□□□ -0.19
LTBR-214ENST00000545445 PRC1O43663 620 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 CASTP20810 708 aaKnown RBP13.88□□□□□ -0.19
LTBR-214ENST00000545445 RPS6KB1P23443 525 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 EXOSC10Q01780 885 aaKnown RBP13.88□□□□□ -0.19
LTBR-214ENST00000545445 PABPC4Q13310 644 aaKnown RBP eCLIP13.88□□□□□ -0.19
LTBR-214ENST00000545445 RUFY3Q7L099 469 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 FBXL16Q8N461 479 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 MKL1Q969V6 931 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 IL17RBQ9NRM6 502 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 TNKSO95271 1327 aa13.88□□□□□ -0.19
LTBR-214ENST00000545445 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
LTBR-214ENST00000545445 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
LTBR-214ENST00000545445 CCND3P30281 292 aaPredicted RBP13.87□□□□□ -0.19
LTBR-214ENST00000545445 LIFRP42702 1097 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 USP14P54578 494 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
LTBR-214ENST00000545445 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 KIAA1683Q9H0B3 1180 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 TMX2Q9Y320 296 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
LTBR-214ENST00000545445 BACE1P56817 501 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 ANTXR2P58335 489 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 FGD1P98174 961 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 WTAPQ15007 396 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 RABEP1Q15276 862 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 SEC23AQ15436 765 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 CCL14Q16627 93 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 SHROOM1Q2M3G4 852 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 LHX8Q68G74 356 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 SIAH1Q8IUQ4 282 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 ENAHQ8N8S7 591 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 FEZ1Q99689 392 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 LBHD1Q9BQE6 289 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 TXNRD2Q9NNW7 524 aa13.86□□□□□ -0.19
LTBR-214ENST00000545445 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
LTBR-214ENST00000545445 NMT2O60551 498 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 ATP2B2Q01814 1243 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 ANKRD1Q15327 319 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 RCSD1Q6JBY9 416 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 USP17L2Q6R6M4 530 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 LPAR1Q92633 364 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 ZKSCAN3Q9BRR0 538 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 AGXT2Q9BYV1 514 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 KAT14Q9H8E8 782 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 PDRG1Q9NUG6 133 aa13.85□□□□□ -0.19
LTBR-214ENST00000545445 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 A0A1W2PRG0 241 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 SH2B2O14492 632 aaPredicted RBP13.84□□□□□ -0.19
LTBR-214ENST00000545445 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
LTBR-214ENST00000545445 MTMR2Q13614 643 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 GMCL1P1Q8NEA9 526 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 GPRC5AQ8NFJ5 357 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 ACER1Q8TDN7 264 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 C12orf42Q96LP6 360 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 KIF2CQ99661 725 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 TMEM47Q9BQJ4 181 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
LTBR-214ENST00000545445 VCPKMTQ9H867 229 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 LY9Q9HBG7 655 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 TMOD4Q9NZQ9 345 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
LTBR-214ENST00000545445 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 F5H6K3 240 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 NEK4P51957 841 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 ATN1P54259 1190 aaPredicted RBP13.83□□□□□ -0.2
LTBR-214ENST00000545445 HERVK_113P62684 666 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 KLRC3Q07444 240 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 Q6ZUG5 572 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
LTBR-214ENST00000545445 CLEC10AQ8IUN9 316 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms