RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SAMSN1Q9NSI8 373 aaKnown RBP6.46□□□□□ -1.38
VPS50-220ENST00000544910 FRMPD2Q68DX3 1309 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 CCDC172P0C7W6 258 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 NOP2P46087 812 aaKnown RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 NT5C2P49902 561 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TBC1D5Q92609 795 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TMCO5BA8MYB1 307 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 CALUO43852 315 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 GOLGA8HP0CJ92 632 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 CASP14P31944 242 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TECP42680 631 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 NCBP1Q09161 790 aaKnown RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 SMC1AQ14683 1233 aaKnown RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 AEBP2Q6ZN18 517 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 SMYD4Q8IYR2 804 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 USP21Q9UK80 565 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 KDM3AQ9Y4C1 1321 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 KLRF2D3W0D1 207 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 BRD3Q15059 726 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 ZFYVE27Q5T4F4 411 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 HAUS3Q68CZ6 603 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TAX1BP1Q86VP1 789 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 SYCP3Q8IZU3 236 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 ENAHQ8N8S7 591 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 EPSTI1Q96J88 318 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 EPB41L4AQ9HCS5 686 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 CLGNO14967 610 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 COBLO75128 1261 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 FAM13AO94988 1023 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 MYL1P05976 194 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 CETN1Q12798 172 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 AK8Q96MA6 479 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 SPAG5Q96R06 1193 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 SELENOOQ9BVL4 669 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 FBXO2Q9UK22 296 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 MED1Q15648 1581 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 ZNF142P52746 1687 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 JCADQ9P266 1359 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TMEM232C9JQI7 657 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 hCG_1984214I3L0E3 225 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 TRAF5O00463 557 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 OPA1O60313 960 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 GUCY1A2P33402 732 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 CCZ1BP86790 482 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 CCZ1P86791 482 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 MFSD14BQ5SR56 506 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 DYMQ7RTS9 669 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 NBPF11Q86T75 865 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 ZNF713Q8N859 430 aaPredicted RBP6.45□□□□□ -1.38
VPS50-220ENST00000544910 ENGASEQ8NFI3 743 aa6.45□□□□□ -1.38
VPS50-220ENST00000544910 RGPD2P0DJD1 1756 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 SOWAHDA6NJG2 315 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 GCOM1H8Y6P7 765 aaPredicted RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 MYZAPP0CAP1 466 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 OAS2P29728 719 aaKnown RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 DNM2P50570 870 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 PFKFB3Q16875 520 aaPredicted RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 ARL6IP4Q66PJ3 421 aaKnown RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 ARMCX5Q6P1M9 558 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 METTL16Q86W50 562 aaKnown RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 FBXL16Q8N461 479 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 AGXT2Q9BYV1 514 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 THAP9Q9H5L6 903 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 USP17L8P0C7I0 530 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 ASIC2Q16515 512 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 DPP8Q6V1X1 898 aaPredicted RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 RASGRP4Q8TDF6 673 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 RSPH14Q9UHP6 348 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 HDAC9Q9UKV0 1011 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 ABCC6O95255 1503 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 CAMTA2O94983 1202 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 EEF1GP26641 437 aaKnown RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 ARID5AQ03989 594 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 DMTNQ08495 405 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 VWA3BQ502W6 1294 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 TOGARAM2Q6ZUX3 1019 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 OR8K1Q8NGG5 319 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 EBAG9O00559 213 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 IGSF3O75054 1194 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 GNA14O95837 355 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 EPB41P11171 864 aaKnown RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 GRAPQ13588 217 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 GRAPLQ8TC17 118 aaPredicted RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 DYNLL2Q96FJ2 89 aa6.44□□□□□ -1.38
VPS50-220ENST00000544910 DHTKD1Q96HY7 919 aaPredicted RBP6.44□□□□□ -1.38
VPS50-220ENST00000544910 SNAP23O00161 211 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 AP5Z1O43299 807 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 CAPN2P17655 700 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 HLTFQ14527 1009 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS50-220ENST00000544910 TCP11X2Q5H9J9 407 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 MAATS1Q7Z4T9 603 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
VPS50-220ENST00000544910 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.43□□□□□ -1.38
VPS50-220ENST00000544910 MYO1AQ9UBC5 1043 aa6.43□□□□□ -1.38
VPS50-220ENST00000544910 SRP68Q9UHB9 627 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms