RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 KCNJ12Q14500 433 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 KRT31Q15323 416 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 ZNF771Q7L3S4 317 aaPredicted RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 RSRC2Q7L4I2 434 aaKnown RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 SRGAP1Q7Z6B7 1085 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 MSL3Q8N5Y2 521 aaKnown RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 KIFC2Q96AC6 838 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 LRRC27Q9C0I9 530 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 MKRN1Q9UHC7 482 aaKnown RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CDC23Q9UJX2 597 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CCDC151A5D8V7 595 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 ZRANB2O95218 330 aaKnown RBP eCLIP14.68□□□□□ -0.06
CPSF7-223ENST00000544669 MCM3P25205 808 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 KRT83P78385 493 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 GRAPQ13588 217 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 TERF2Q15554 542 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 VPS72Q15906 364 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 WHAMMP3Q1A5X7 153 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 HSP90AA4PQ58FG1 418 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
CPSF7-223ENST00000544669 GRAPLQ8TC17 118 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-223ENST00000544669 NUP88Q99567 741 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-223ENST00000544669 MYH6P13533 1939 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 TEX33O43247 280 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 RHOBTB3O94955 611 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 PRDX5P30044 214 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 CASP14P31944 242 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 DNM2P50570 870 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 STX17P56962 302 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 COBLL1Q53SF7 1204 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 SOGA3Q5TF21 947 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 ZNF662Q6ZS27 426 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 ADSSL1Q8N142 457 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 OR8K1Q8NGG5 319 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 HNRNPLLQ8WVV9 542 aaKnown RBP14.67□□□□□ -0.06
CPSF7-223ENST00000544669 PRDM10Q9NQV6 1147 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 ABHD10Q9NUJ1 306 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 ZNHIT6Q9NWK9 470 aaKnown RBP14.67□□□□□ -0.06
CPSF7-223ENST00000544669 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
CPSF7-223ENST00000544669 MYH14Q7Z406 1995 aaKnown RBP14.67□□□□□ -0.06
CPSF7-223ENST00000544669 hCG_1642624A0A1W2PR95 340 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 M0R2N6 131 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 IPO7O95373 1038 aaKnown RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 FGFR1OPO95684 399 aaKnown RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 PNMA6AP0CW24 399 aaPredicted RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 TBC1D22AQ8WUA7 517 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 ZMYND12Q9H0C1 365 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 SEC63Q9UGP8 760 aaKnown RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 A0A1B0GUL6 1792 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 LAMB1P07942 1786 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 ESYT2A0FGR8 921 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 KCNQ2O43526 872 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 GYPCP04921 128 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 ADRA2BP18089 450 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 RPGRIP1Q96KN7 1286 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 WDR24Q96S15 920 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 HAUS4Q9H6D7 363 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 KBTBD4Q9NVX7 518 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 MAD2L2Q9UI95 211 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 PCDHA6Q9UN73 950 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 LUC7L2Q9Y383 392 aaKnown RBP14.66□□□□□ -0.06
CPSF7-223ENST00000544669 PCDHA8Q9Y5H6 950 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
CPSF7-223ENST00000544669 KIAA1551Q9HCM1 1747 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 ATP2B4P23634 1241 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 UBXN1Q04323 297 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 GOLGA8FQ08AF8 430 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 GOLGA8DPQ0D2H9 430 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 KIF4BQ2VIQ3 1234 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 TXLNBQ8N3L3 684 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 GIMAP8Q8ND71 665 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-223ENST00000544669 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-223ENST00000544669 NAPGQ99747 312 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-223ENST00000544669 IRS2Q9Y4H2 1338 aa14.65□□□□□ -0.06
CPSF7-223ENST00000544669 LGALS16A8MUM7 142 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 GNPATO15228 680 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 NMT2O60551 498 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
CPSF7-223ENST00000544669 USP17L8P0C7I0 530 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 TM4SF1P30408 202 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 KRT9P35527 623 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 RAD9BQ6WBX8 426 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 MB21D1Q8N884 522 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 BLZF1Q9H2G9 400 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 ACBD3Q9H3P7 528 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 IL17RBQ9NRM6 502 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms