RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 hCG_1984214I3L0E3 225 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 CALML3P27482 149 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 NR5A1Q13285 461 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 TYW1BQ6NUM6 668 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 DLK2Q6UY11 383 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 ZNF713Q8N859 430 aaPredicted RBP35.03■■■■□ 3.2
CCM2-219ENST00000544363 ZKSCAN4Q969J2 545 aaPredicted RBP35.03■■■■□ 3.2
CCM2-219ENST00000544363 SPATA32Q96LK8 384 aa35.03■■■■□ 3.2
CCM2-219ENST00000544363 PNMA6FA0A0J9YX94 578 aa35.02■■■■□ 3.2
CCM2-219ENST00000544363 USP17L10C9JJH3 530 aa35.02■■■■□ 3.2
CCM2-219ENST00000544363 BTNL9Q6UXG8 535 aa35.02■■■■□ 3.2
CCM2-219ENST00000544363 LEO1Q8WVC0 666 aaPredicted RBP35.02■■■■□ 3.2
CCM2-219ENST00000544363 ELP1O95163 1332 aa35.02■■■■□ 3.2
CCM2-219ENST00000544363 TMEM232C9JQI7 657 aa35.01■■■■□ 3.19
CCM2-219ENST00000544363 USP2O75604 605 aaPredicted RBP35.01■■■■□ 3.19
CCM2-219ENST00000544363 CCDC12Q8WUD4 166 aaPredicted RBP35.01■■■■□ 3.19
CCM2-219ENST00000544363 FEZ1Q99689 392 aa35.01■■■■□ 3.19
CCM2-219ENST00000544363 PICK1Q9NRD5 415 aa35.01■■■■□ 3.19
CCM2-219ENST00000544363 ZYXQ15942 572 aaKnown RBP35■■■■□ 3.19
CCM2-219ENST00000544363 ZBTB5O15062 677 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 NOL9Q5SY16 702 aaKnown RBP34.99■■■■□ 3.19
CCM2-219ENST00000544363 GALNT17Q6IS24 598 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.99■■■■□ 3.19
CCM2-219ENST00000544363 FTOQ9C0B1 505 aaKnown RBP eCLIP34.99■■■■□ 3.19
CCM2-219ENST00000544363 KIAA1683Q9H0B3 1180 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 RTEL1Q9NZ71 1219 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 DDX49Q9Y6V7 483 aaKnown RBP34.99■■■■□ 3.19
CCM2-219ENST00000544363 NAPAP54920 295 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 CEBPZQ03701 1054 aaKnown RBP34.99■■■■□ 3.19
CCM2-219ENST00000544363 WDR18Q9BV38 432 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 RCOR1Q9UKL0 485 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 PCDHA4Q9UN74 947 aa34.99■■■■□ 3.19
CCM2-219ENST00000544363 GADD45BO75293 160 aaPredicted RBP34.98■■■■□ 3.19
CCM2-219ENST00000544363 PTPRAP18433 802 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 IKQ13123 557 aaPredicted RBP34.98■■■■□ 3.19
CCM2-219ENST00000544363 PRKG1Q13976 671 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 FAM83BQ5T0W9 1011 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 SYDE2Q5VT97 1194 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 AS3MTQ9HBK9 375 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 POLR3EQ9NVU0 708 aa34.98■■■■□ 3.19
CCM2-219ENST00000544363 PPP1R12BO60237 982 aaPredicted RBP34.97■■■■□ 3.19
CCM2-219ENST00000544363 BLIDQ8IZY5 108 aa34.97■■■■□ 3.19
CCM2-219ENST00000544363 DAGLBQ8NCG7 672 aa34.97■■■■□ 3.19
CCM2-219ENST00000544363 TNFRSF25Q93038 417 aa34.97■■■■□ 3.19
CCM2-219ENST00000544363 CDCA5Q96FF9 252 aa34.97■■■■□ 3.19
CCM2-219ENST00000544363 ZMYND12Q9H0C1 365 aa34.97■■■■□ 3.19
CCM2-219ENST00000544363 UBE2HP62256 183 aa34.96■■■■□ 3.19
CCM2-219ENST00000544363 KLHL40Q2TBA0 621 aa34.96■■■■□ 3.19
CCM2-219ENST00000544363 STAT2P52630 851 aa34.95■■■■□ 3.19
CCM2-219ENST00000544363 LPAR1Q92633 364 aa34.95■■■■□ 3.19
CCM2-219ENST00000544363 CLIC4Q9Y696 253 aa34.95■■■■□ 3.19
CCM2-219ENST00000544363 PLA2G6O60733 806 aa34.95■■■■□ 3.18
CCM2-219ENST00000544363 NF2P35240 595 aa34.95■■■■□ 3.18
CCM2-219ENST00000544363 NASPP49321 788 aaPredicted RBP34.95■■■■□ 3.18
CCM2-219ENST00000544363 MAP3K9P80192 1104 aa34.95■■■■□ 3.18
CCM2-219ENST00000544363 GPT2Q8TD30 523 aa34.95■■■■□ 3.18
CCM2-219ENST00000544363 ESYT2A0FGR8 921 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 PPP1R11O60927 126 aaPredicted RBP34.94■■■■□ 3.18
CCM2-219ENST00000544363 MBD3O95983 291 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 CDC37Q16543 378 aaPredicted RBP34.94■■■■□ 3.18
CCM2-219ENST00000544363 QRICH1Q2TAL8 776 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 RILPL1Q5EBL4 403 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 ANO1Q5XXA6 986 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 ZNF280CQ8ND82 737 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 CHURC1Q8WUH1 139 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 COA7Q96BR5 231 aa34.94■■■■□ 3.18
CCM2-219ENST00000544363 USP14P54578 494 aa34.93■■■■□ 3.18
CCM2-219ENST00000544363 SPP2Q13103 211 aa34.93■■■■□ 3.18
CCM2-219ENST00000544363 PPP1R18Q6NYC8 613 aa34.93■■■■□ 3.18
CCM2-219ENST00000544363 C6orf50Q9HD87 102 aa34.93■■■■□ 3.18
CCM2-219ENST00000544363 SMCO2A6NFE2 343 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 DCAF8L1A6NGE4 600 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 YEATS4O95619 227 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 GNA11P29992 359 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 PPP1R3FQ6ZSY5 799 aaPredicted RBP34.92■■■■□ 3.18
CCM2-219ENST00000544363 LINC00301Q8NCQ3 95 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 PRR12Q9ULL5 1215 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 CLEC11AQ9Y240 323 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 ZHX2Q9Y6X8 837 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 M0R2N6 131 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 ADAMTS3O15072 1205 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 WDR46O15213 610 aaKnown RBP34.92■■■■□ 3.18
CCM2-219ENST00000544363 TOB1P50616 345 aaPredicted RBP34.92■■■■□ 3.18
CCM2-219ENST00000544363 MTMR2Q13614 643 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 EARS2Q5JPH6 523 aaKnown RBP34.92■■■■□ 3.18
CCM2-219ENST00000544363 FAM160B2Q86V87 743 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 FEM1BQ9UK73 627 aa34.92■■■■□ 3.18
CCM2-219ENST00000544363 IREB2P48200 963 aaKnown RBP34.91■■■■□ 3.18
CCM2-219ENST00000544363 BACE1P56817 501 aa34.91■■■■□ 3.18
CCM2-219ENST00000544363 STK38Q15208 465 aa34.9■■■■□ 3.18
CCM2-219ENST00000544363 SF3A1Q15459 793 aaKnown RBP34.9■■■■□ 3.18
CCM2-219ENST00000544363 FAM205CA6NFA0 338 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 VGLL4Q14135 290 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 RRAGCQ9HB90 399 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 EMILIN3Q9NT22 766 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 SNCAIPQ9Y6H5 919 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 PHIPQ8WWQ0 1821 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 PAPPA2Q9BXP8 1791 aa34.89■■■■□ 3.18
CCM2-219ENST00000544363 POTEIP0CG38 1075 aa34.88■■■■□ 3.17
CCM2-219ENST00000544363 POTEJP0CG39 1038 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms