RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CPA4Q9UI42 421 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 MYPNQ86TC9 1320 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CEP350Q5VT06 3117 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PALM3A6NDB9 673 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PLA2G6O60733 806 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 SYDE2Q5VT97 1194 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CFHR5Q9BXR6 569 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CPVLQ9H3G5 476 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PRR12Q9ULL5 1215 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ST18O60284 1047 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 METAP2P50579 478 aaKnown RBP eCLIP16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RCAN1P53805 252 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PLS1Q14651 629 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RTN1Q16799 776 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 LBX2Q6XYB7 198 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 MB21D1Q8N884 522 aa16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RBM28Q9NW13 759 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 VWA5AO00534 786 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ZBED4O75132 1171 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 HSPA1AP0DMV8 641 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 HSPA1BP0DMV9 641 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PDIA3P30101 505 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GNAQP50148 359 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 EVCP57679 992 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 STK3Q13188 491 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 VAT1LQ9HCJ6 419 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 A0A0G2JMZ2 1700 aa16.85■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PEX10O60683 326 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 SNAP25P60880 206 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ZNF274Q96GC6 653 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 LZTS2Q9BRK4 669 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 TXNRD2Q9NNW7 524 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ADAMTS5Q9UNA0 930 aa16.84■□□□□ 0.29
TNFRSF1A-216ENST00000543995 MYH6P13533 1939 aa16.83■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CCDC196A0A1B0GTZ2 297 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 FDX1P10109 184 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 BCRP11274 1271 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ERVK-9P63128 1117 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ERVK-24P63145 666 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ADGRF4Q8IZF3 695 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CPXCR1Q8N123 301 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 IL27Q8NEV9 243 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SLC38A10Q9HBR0 1119 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 BTBD7Q9P203 1132 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
TNFRSF1A-216ENST00000543995 GPR25O00155 361 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 FOXN1O15353 648 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCDC174Q6PII3 467 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PCNTO95613 3336 aa16.82■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CNMDO75829 334 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CDC27P30260 824 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CCNA1P78396 465 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SP3Q02447 781 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 TMEM132BQ14DG7 1078 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 PIBF1Q8WXW3 757 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 JMJD4Q9H9V9 463 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 RAVER2Q9HCJ3 691 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CYTH3O43739 400 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 ADD1P35611 737 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 Q3C1V9 767 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
TNFRSF1A-216ENST00000543995 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms