RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 ESR2Q92731 530 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 ESYT1Q9BSJ8 1104 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
C2CD3-217ENST00000542452 RNF208Q9H0X6 261 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
C2CD3-217ENST00000542452 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
C2CD3-217ENST00000542452 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 RIPK3Q9Y572 518 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 ZNF536O15090 1300 aa13.59□□□□□ -0.23
C2CD3-217ENST00000542452 NEFLP07196 543 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 GJB1P08034 283 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 HOXC6P09630 235 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 STAT3P40763 770 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 SNAP25P60880 206 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 COL9A3Q14050 684 aaPredicted RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 TTBK2Q6IQ55 1244 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 MAP4K1Q92918 833 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 CTNNA3Q9UI47 895 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 MCM3APO60318 1980 aa13.58□□□□□ -0.24
C2CD3-217ENST00000542452 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
C2CD3-217ENST00000542452 ATP2A1O14983 1001 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 SLC25A27O95847 323 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 PDHBP11177 359 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 CCND3P30281 292 aaPredicted RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 GJA8P48165 433 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 STAT2P52630 851 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 CACNB2Q08289 660 aaPredicted RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 CPXCR1Q8N123 301 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 U2AF1L4Q8WU68 220 aaKnown RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 TEX13BQ9BXU2 312 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 MROH8Q9H579 483 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 ZSWIM5Q9P217 1185 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 ISY1Q9ULR0 285 aaKnown RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 IVNS1ABPQ9Y6Y0 642 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
C2CD3-217ENST00000542452 TNKSO95271 1327 aa13.57□□□□□ -0.24
C2CD3-217ENST00000542452 PLA2G6O60733 806 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 PGK2P07205 417 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 SLC16A2P36021 539 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 FAM160B2Q86V87 743 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 TRPV1Q8NER1 839 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 DEFB118Q96PH6 123 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
C2CD3-217ENST00000542452 PRR12Q9ULL5 1215 aa13.56□□□□□ -0.24
C2CD3-217ENST00000542452 E7EWF7 191 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 ZBED4O75132 1171 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 SGPL1O95470 568 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 CYP2C19P33261 490 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 ANTXR2P58335 489 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 SEC23AQ15436 765 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 BTNL9Q6UXG8 535 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
C2CD3-217ENST00000542452 DGKHQ86XP1 1220 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 ABRAQ8N0Z2 381 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 FGD4Q96M96 766 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 AGBL1Q96MI9 1066 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 TTC14Q96N46 770 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 MMP19Q99542 508 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 KRT23Q9C075 422 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
C2CD3-217ENST00000542452 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 GPCPD1Q9NPB8 672 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
C2CD3-217ENST00000542452 MYH6P13533 1939 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 STRNO43815 780 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 FCER1AP12319 257 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 CYBAP13498 195 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 NT5C2P49902 561 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-217ENST00000542452 OAZ1P54368 228 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-217ENST00000542452 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 CCDC174Q6PII3 467 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-217ENST00000542452 TRMT44Q8IYL2 757 aaKnown RBP13.54□□□□□ -0.24
C2CD3-217ENST00000542452 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms