RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 TNKSO95271 1327 aa16.16■□□□□ 0.18
TNFSF13B-206ENST00000542136 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 PEX10O60683 326 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 HOXC6P09630 235 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 CAPN2P17655 700 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 PTPREP23469 700 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 KRT32Q14532 448 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 STOX1Q6ZVD7 989 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 CYB5R4Q7L1T6 521 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 KCNB2Q92953 911 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 TEX13BQ9BXU2 312 aa16.15■□□□□ 0.18
TNFSF13B-206ENST00000542136 ERICH2A1L162 156 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 ADCY3O60266 1144 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 ERCC3P19447 782 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 MCM5P33992 734 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 RGS2P41220 211 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 IFIT1BQ5T764 474 aaKnown RBP16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 KIFC2Q96AC6 838 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 ZNF333Q96JL9 665 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 TAF6LQ9Y6J9 622 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 WDR19Q8NEZ3 1342 aa16.14■□□□□ 0.17
TNFSF13B-206ENST00000542136 DOCK3Q8IZD9 2030 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 IFIT3O14879 490 aaKnown RBP16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 MAP2K5Q13163 448 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 GRB14Q14449 540 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 PLS1Q14651 629 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 ASPRV1Q53RT3 343 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 MAP3K14Q99558 947 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 CWC22Q9HCG8 908 aaKnown RBP16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 SLC5A4Q9NY91 659 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 FBXO40Q9UH90 709 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 PRR12Q9ULL5 1215 aa16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 CTDP1Q9Y5B0 961 aaPredicted RBP16.13■□□□□ 0.17
TNFSF13B-206ENST00000542136 FCER1AP12319 257 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 HSPA4P34932 840 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 UBXN2AP68543 259 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 CHST13Q8NET6 341 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 APBA2Q99767 749 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 MAF1Q9H063 256 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
TNFSF13B-206ENST00000542136 CCDC85CA6NKD9 419 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 LIFRP42702 1097 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 ANTXR2P58335 489 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 WTAPQ15007 396 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
TNFSF13B-206ENST00000542136 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 IGHA2P01877 340 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 HMGCRP04035 888 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 ICAM1P05362 532 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 RGS19P49795 217 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 NEK1Q96PY6 1258 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 RANBP17Q9H2T7 1088 aaKnown RBP16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 ZNF536O15090 1300 aa16.1■□□□□ 0.17
TNFSF13B-206ENST00000542136 PRC1O43663 620 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 ADORA2AP29274 412 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 EXOSC10Q01780 885 aaKnown RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 TROAPQ12815 778 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 KCTD2Q14681 263 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 OLFML2BQ68BL8 750 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 DHX32Q7L7V1 743 aaKnown RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
TNFSF13B-206ENST00000542136 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 CYP2B6P20813 491 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 SMARCA1P28370 1054 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 CATIPQ7Z7H3 387 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 DPP9Q86TI2 863 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 CPXCR1Q8N123 301 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
TNFSF13B-206ENST00000542136 MMP19Q99542 508 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms