RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 HNRNPLLQ8WVV9 542 aaKnown RBP4.98□□□□□ -1.61
USP28-210ENST00000542033 FAM168AQ92567 244 aa4.98□□□□□ -1.61
USP28-210ENST00000542033 ARMC5Q96C12 935 aa4.98□□□□□ -1.61
USP28-210ENST00000542033 DSCC1Q9BVC3 393 aa4.98□□□□□ -1.61
USP28-210ENST00000542033 HIRIP3Q9BW71 556 aaPredicted RBP4.98□□□□□ -1.61
USP28-210ENST00000542033 CHST7Q9NS84 486 aa4.98□□□□□ -1.61
USP28-210ENST00000542033 PCDHA11Q9Y5I1 949 aa4.98□□□□□ -1.61
USP28-210ENST00000542033 DNAJC25-GNG10A0A024R161 153 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 PRAMEF1O95521 474 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 NAT2P11245 290 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 ITGA4P13612 1032 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 SNW1Q13573 536 aaKnown RBP4.97□□□□□ -1.61
USP28-210ENST00000542033 KCNMB1Q16558 191 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 ANKRD39Q53RE8 183 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 ADAT2Q7Z6V5 191 aaKnown RBP4.97□□□□□ -1.61
USP28-210ENST00000542033 FAM178BQ8IXR5 827 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 OXR1Q8N573 874 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 TCTN2Q96GX1 697 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 KIRREL1Q96J84 757 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 DRC1Q96MC2 740 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 HAUS7Q99871 368 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 GBP3Q9H0R5 595 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 GFOD1Q9NXC2 390 aa4.97□□□□□ -1.61
USP28-210ENST00000542033 PPM1BO75688 479 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 CD247P20963 164 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 HK2P52789 917 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 CHRNEQ04844 493 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 RALGPS1Q5JS13 557 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 CWF19L1Q69YN2 538 aaKnown RBP4.96□□□□□ -1.62
USP28-210ENST00000542033 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
USP28-210ENST00000542033 SPPL2CQ8IUH8 684 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 LILRA2Q8N149 483 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 LINC00116Q8NCU8 138 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 PDZD8Q8NEN9 1154 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 FMNL2Q96PY5 1086 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 ADAMTS10Q9H324 1103 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 GP6Q9HCN6 339 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 FAM53CQ9NYF3 392 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 WHRNQ9P202 907 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 TCFL5Q9UL49 500 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 ZNF451Q9Y4E5 1061 aa4.96□□□□□ -1.62
USP28-210ENST00000542033 FITM1A5D6W6 292 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 ANKRD34BA5PLL1 514 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 MEIS1O00470 390 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 SHOXO15266 292 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 CBFA2T2O43439 604 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 KLF4O43474 513 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 IGSF3O75054 1194 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 HPXP02790 462 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 EPHX1P07099 455 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 GLI1P08151 1106 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 YBX3P16989 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
USP28-210ENST00000542033 TEKQ02763 1124 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 RAB33AQ14088 237 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 TMEM67Q5HYA8 995 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 SOGA3Q5TF21 947 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 NBPF6Q5VWK0 638 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 USHBP1Q8N6Y0 703 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 ANKS4BQ8N8V4 417 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 ABHD4Q8TB40 342 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 KLHL6Q8WZ60 621 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 BRF1Q92994 677 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 NBPF4Q96M43 638 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 FGD4Q96M96 766 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 APBA2Q99767 749 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 ST7Q9NRC1 585 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 C19orf73Q9NVV2 129 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 SUGT1Q9Y2Z0 365 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 FHOD1Q9Y613 1164 aa4.95□□□□□ -1.62
USP28-210ENST00000542033 B2RBV5 119 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 GSNP06396 782 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 SYPP08247 313 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 ZGLP1P0C6A0 271 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 RPL10P27635 214 aaKnown RBP4.94□□□□□ -1.62
USP28-210ENST00000542033 BMP8BP34820 402 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 ZNF143P52747 638 aaPredicted RBP4.94□□□□□ -1.62
USP28-210ENST00000542033 ZNF445P59923 1031 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 DDR2Q16832 855 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 EEPD1Q7L9B9 569 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 WAPLQ7Z5K2 1190 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 FIBCD1Q8N539 461 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 CELF2-AS1Q8N7Q2 184 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 ADCY4Q8NFM4 1077 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 FOXP3Q9BZS1 431 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 KLHL25Q9H0H3 589 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 NOL6Q9H6R4 1146 aaKnown RBP4.94□□□□□ -1.62
USP28-210ENST00000542033 ZMYM5Q9UJ78 669 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 MINPP1Q9UNW1 487 aa4.94□□□□□ -1.62
USP28-210ENST00000542033 SF3B6Q9Y3B4 125 aaKnown RBP4.94□□□□□ -1.62
USP28-210ENST00000542033 A0A087WZG4 1122 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 GJB6O95452 261 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 RBL2Q08999 1139 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 PPP2R5DQ14738 602 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 NR0B2Q15466 257 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 CARMIL2Q6F5E8 1435 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 MPZL3Q6UWV2 235 aa4.93□□□□□ -1.62
USP28-210ENST00000542033 PMFBP1Q8TBY8 1022 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms