RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 INHAP05111 366 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 PDHBP11177 359 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
YBX3-212ENST00000542002 SLC16A2P36021 539 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 GRB14Q14449 540 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 SEC23AQ15436 765 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 CHST3Q7LGC8 479 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 RIOX2Q8IUF8 465 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
YBX3-212ENST00000542002 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 KRT23Q9C075 422 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
YBX3-212ENST00000542002 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.57
YBX3-212ENST00000542002 MYH8P13535 1937 aa11.46□□□□□ -0.58
YBX3-212ENST00000542002 SLC27A2O14975 620 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 PLA2G6O60733 806 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CDC45O75419 566 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 SNHG28P0DPA3 235 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CCL5P13501 91 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
YBX3-212ENST00000542002 ADORA2AP29274 412 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 STAT2P52630 851 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 ANTXR2P58335 489 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CREB3L3Q68CJ9 461 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CPXCR1Q8N123 301 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 MROH8Q9H579 483 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
YBX3-212ENST00000542002 PRR12Q9ULL5 1215 aa11.45□□□□□ -0.58
YBX3-212ENST00000542002 PLXNB2O15031 1838 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 TNKSO95271 1327 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 STRNO43815 780 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 ZBED4O75132 1171 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
YBX3-212ENST00000542002 PGK2P07205 417 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 HOXC6P09630 235 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 RGS2P41220 211 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 SNRNP48Q6IEG0 339 aaKnown RBP11.44□□□□□ -0.58
YBX3-212ENST00000542002 BTNL9Q6UXG8 535 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 IQCA1Q86XH1 822 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
YBX3-212ENST00000542002 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 CHURC1Q8WUH1 139 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
YBX3-212ENST00000542002 MGAMO43451 1857 aa11.44□□□□□ -0.58
YBX3-212ENST00000542002 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 SLC25A27O95847 323 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 NT5C2P49902 561 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
YBX3-212ENST00000542002 ZNF543Q08ER8 600 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 MAP3K21Q5TCX8 1036 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 FAM160B2Q86V87 743 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 IGDCC4Q8TDY8 1250 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 UBA5Q9GZZ9 404 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 RNF208Q9H0X6 261 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 CWC22Q9HCG8 908 aaKnown RBP11.43□□□□□ -0.58
YBX3-212ENST00000542002 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
YBX3-212ENST00000542002 HMGCRP04035 888 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 GJB1P08034 283 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 FCER1AP12319 257 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 CCND3P30281 292 aaPredicted RBP11.42□□□□□ -0.58
YBX3-212ENST00000542002 CYP2C19P33261 490 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 UBXN2AP68543 259 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 IKQ13123 557 aaPredicted RBP11.42□□□□□ -0.58
YBX3-212ENST00000542002 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 ZNF792Q3KQV3 632 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 CCDC174Q6PII3 467 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 DPP9Q86TI2 863 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 ABRAQ8N0Z2 381 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 TRPV1Q8NER1 839 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 NCOA7Q8NI08 942 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 MMP19Q99542 508 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 APBA2Q99767 749 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 UBAC1Q9BSL1 405 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 RANBP17Q9H2T7 1088 aaKnown RBP11.42□□□□□ -0.58
YBX3-212ENST00000542002 KAT14Q9H8E8 782 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms