RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 RNF26Q9BY78 433 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 CRNKL1Q9BZJ0 848 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 NHEJ1Q9H9Q4 299 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 PRDM11Q9NQV5 511 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 B4DLN1 442 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 PTGDRQ13258 359 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 WDR93Q6P2C0 686 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 ZNF444Q8N0Y2 327 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 FAM89AQ96GI7 184 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 TUBGCP2Q9BSJ2 902 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 ANKZF1Q9H8Y5 726 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 RAB21Q9UL25 225 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 NR1D1P20393 614 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 ADD2P35612 726 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 LONP1P36776 959 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 RNASE9P60153 205 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 LACTBP83111 547 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 GUCY2DQ02846 1103 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 SV2BQ7L1I2 683 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 RRAGAQ7L523 313 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 GSPT2Q8IYD1 628 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 MB21D1Q8N884 522 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 KIFC2Q96AC6 838 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 THAP9Q9H5L6 903 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 SUGCTQ9HAC7 445 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 STRN4Q9NRL3 753 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 FAM207AQ9NSI2 230 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 STIM2Q9P246 746 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 RNF14Q9UBS8 474 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 MAP2K7O14733 419 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 PRPHP41219 470 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 ZBED6P86452 979 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 PDCLQ13371 301 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 RAPGEF1Q13905 1077 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 VWA3BQ502W6 1294 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 IFT74Q96LB3 600 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 PUS3Q9BZE2 481 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 BAIAP2L1Q9UHR4 511 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 LCMT1Q9UIC8 334 aa7.6□□□□□ -1.19
SCAPER-203ENST00000538941 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 UTP11Q9Y3A2 253 aaKnown RBP7.6□□□□□ -1.19
SCAPER-203ENST00000538941 DIP2CQ9Y2E4 1556 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 CPDO75976 1380 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 IRS4O14654 1257 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 ARMC9Q7Z3E5 817 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 SPATA5Q8NB90 893 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 EPSTI1Q96J88 318 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 LRWD1Q9UFC0 647 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 HPSEQ9Y251 543 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 SPATA31D1Q6ZQQ2 1576 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 CEP170BQ9Y4F5 1589 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PREX1Q8TCU6 1659 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 hCG_1642624A0A1W2PR95 340 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 EIF3HO15372 352 aaKnown RBP eCLIP7.59□□□□□ -1.198e-6■□□□□ 10.6
SCAPER-203ENST00000538941 HEXIM1O94992 359 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 RPS6KA1Q15418 735 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 GLE1Q53GS7 698 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 SFMBT2Q5VUG0 894 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 TCERG1LQ5VWI1 586 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 N4BP2L2Q92802 583 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PLCB1Q9NQ66 1216 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 HDAC6Q9UBN7 1215 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 ADD3Q9UEY8 706 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 FBXO2Q9UK22 296 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 TMEM131LA2VDJ0 1609 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 UBN2Q6ZU65 1347 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 TLDC2A0PJX2 215 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 HMGB1P1B2RPK0 211 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 ATP1A1P05023 1023 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 VIMP08670 466 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PHKG2P15735 406 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 TRAPPC10P48553 1259 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 NAPAP54920 295 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PPARAQ07869 468 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 KRT71Q3SY84 523 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 CROCCP2Q86T23 111 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PNMA8AQ86V59 439 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 HELBQ8NG08 1087 aaPredicted RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 LPIN2Q92539 896 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 CNOT6LQ96LI5 555 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 CXorf56Q9H5V9 222 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 FAM53CQ9NYF3 392 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 MTRF1LQ9UGC7 380 aaKnown RBP7.59□□□□□ -1.19
SCAPER-203ENST00000538941 RIPOR2Q9Y4F9 1068 aa7.59□□□□□ -1.19
SCAPER-203ENST00000538941 PRDM1O75626 825 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 CHGBP05060 677 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 LTKP29376 864 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 CDC27P30260 824 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 ATP11AP98196 1134 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 ASIC2Q16515 512 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
SCAPER-203ENST00000538941 NOA1Q8NC60 698 aaKnown RBP7.58□□□□□ -1.2
SCAPER-203ENST00000538941 WHAMMQ8TF30 809 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 DHTKD1Q96HY7 919 aaPredicted RBP7.58□□□□□ -1.2
SCAPER-203ENST00000538941 MMS19Q96T76 1030 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 AGXT2Q9BYV1 514 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 EPB41L5Q9HCM4 733 aa7.58□□□□□ -1.2
SCAPER-203ENST00000538941 C6orf50Q9HD87 102 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms