RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 AKAP2Q9Y2D5 859 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 SLIT1O75093 1534 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 MYH7P12883 1935 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 MYH13Q9UKX3 1938 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 PEAK1Q9H792 1746 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 A0A1W2PNR3 127 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 CTAGE15A4D2H0 777 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 M0R2N6 131 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 FSBPO95073 299 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 CTAGE8P0CG41 777 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 HNRNPH1P31943 449 aaKnown RBP7.59□□□□□ -1.19
USP28-207ENST00000538475 ME1P48163 572 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 MNAT1P51948 309 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 EPHA4P54764 986 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 FOXK2Q01167 660 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 PPFIA1Q13136 1202 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 TEAD4Q15561 434 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 TSHZ3Q63HK5 1081 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 SPECC1LQ69YQ0 1117 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 LYPD4Q6UWN0 246 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 G2E3Q7L622 706 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 CTAGE6Q86UF2 777 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 ANKRD18AQ8IVF6 992 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP28-207ENST00000538475 CTAGE4Q8IX94 777 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 TRIML1Q8N9V2 468 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 C3orf20Q8ND61 904 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 ABHD17AQ96GS6 310 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 NEK1Q96PY6 1258 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
USP28-207ENST00000538475 C19orf44Q9H6X5 657 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 ANKZF1Q9H8Y5 726 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 NEUROD4Q9HD90 331 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 BSDC1Q9NW68 430 aaPredicted RBP7.59□□□□□ -1.19
USP28-207ENST00000538475 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
USP28-207ENST00000538475 FAN1Q9Y2M0 1017 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 OVOS2A0A0G2JMS6 1433 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 OVOS2A0A0J9YW53 1432 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 OVOS2Q6IE36 1432 aa7.59□□□□□ -1.19
USP28-207ENST00000538475 USP31Q70CQ4 1352 aa7.59□□□□□ -1.2
USP28-207ENST00000538475 SALL1Q9NSC2 1324 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 CTAGE9A4FU28 777 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 GOLIM4O00461 696 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 PPP6R2O75170 966 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 PRPF6O94906 941 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 SERPINC1P01008 464 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 IFIT2P09913 472 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 RFX1P22670 979 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 RDXP35241 583 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 MAP2K3P46734 347 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 MRPL12P52815 198 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 PSMA6P60900 246 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 IRX1P78414 480 aaPredicted RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 CRYMQ14894 314 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 CRTC2Q53ET0 693 aaPredicted RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 EMC10Q5UCC4 262 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 FAM173BQ6P4H8 233 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 ZNF662Q6ZS27 426 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 UBE3BQ7Z3V4 1068 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 GPATCH11Q8N954 259 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 LINC00301Q8NCQ3 95 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 C1orf131Q8NDD1 294 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 CCDC148Q8NFR7 591 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 CCDC12Q8WUD4 166 aaPredicted RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 HINFPQ9BQA5 517 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 ZCCHC2Q9C0B9 1178 aaKnown RBP7.58□□□□□ -1.2
USP28-207ENST00000538475 GOLPH3LQ9H4A5 285 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 FAM204AQ9H8W3 233 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 IL1RAPL2Q9NP60 686 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 PCDHA7Q9UN72 937 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 PCDHGC4Q9Y5F7 938 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 TECPR2O15040 1411 aa7.58□□□□□ -1.2
USP28-207ENST00000538475 CPS1P31327 1500 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 WDR17Q8IZU2 1322 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 MYH6P13533 1939 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L10C9JJH3 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L12C9JPN9 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L21D6R901 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 GOLGA8KD6RF30 607 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 F6X3S4 739 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 ATXN7O15265 892 aaPredicted RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 BNIP3LO60238 219 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms