RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 EDC3Q96F86 508 aaKnown RBP18.52■□□□□ 0.56
SCARB1-205ENST00000538291 LOC102724428A0A0B4J2F2 783 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 SIK1P57059 783 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 MTMR3Q13615 1198 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 HADHQ16836 314 aaKnown RBP18.52■□□□□ 0.56
SCARB1-205ENST00000538291 PDZD4Q76G19 769 aaPredicted RBP18.52■□□□□ 0.56
SCARB1-205ENST00000538291 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 ZNF804BA4D1E1 1349 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 DDAH1O94760 285 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 SCG2P13521 617 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 MTX1Q13505 466 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.56
SCARB1-205ENST00000538291 PARP2Q9UGN5 583 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 ARMCX3Q9UH62 379 aaPredicted RBP18.52■□□□□ 0.56
SCARB1-205ENST00000538291 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.55
SCARB1-205ENST00000538291 MAP7Q14244 749 aa18.52■□□□□ 0.55
SCARB1-205ENST00000538291 PSMB7Q99436 277 aa18.52■□□□□ 0.55
SCARB1-205ENST00000538291 RAB20Q9NX57 234 aa18.52■□□□□ 0.55
SCARB1-205ENST00000538291 FOSP01100 380 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-205ENST00000538291 VPS37BQ9H9H4 285 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 DDX25Q9UHL0 483 aaKnown RBP18.51■□□□□ 0.55
SCARB1-205ENST00000538291 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 TMEM191BP0C7N4 346 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 SCYL2Q6P3W7 929 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 CARD6Q9BX69 1037 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 RBSNQ9H1K0 784 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 PCP11498 1178 aaKnown RBP18.51■□□□□ 0.55
SCARB1-205ENST00000538291 CCDC62Q6P9F0 684 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 SORBS3O60504 671 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 STAM2O75886 525 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 POLGP54098 1239 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-205ENST00000538291 DMP1Q13316 513 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-205ENST00000538291 PNOCQ13519 176 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 ADALQ6DHV7 355 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 CCDC51Q96ER9 411 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 CCDC17Q96LX7 622 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 RAB17Q9H0T7 212 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 XDHP47989 1333 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 SEMA3EO15041 775 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 ATP11AP98196 1134 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 LONRF2Q1L5Z9 754 aa18.51■□□□□ 0.55
SCARB1-205ENST00000538291 NDUFAB1O14561 156 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 PANK4Q9NVE7 773 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 THRAP3Q9Y2W1 955 aaKnown RBP18.5■□□□□ 0.55
SCARB1-205ENST00000538291 GBP6Q6ZN66 633 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 CMTR1Q8N1G2 835 aaKnown RBP18.5■□□□□ 0.55
SCARB1-205ENST00000538291 P3H4Q92791 437 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
SCARB1-205ENST00000538291 PLCB1Q9NQ66 1216 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 MAST1Q9Y2H9 1570 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 ZMYM6O95789 1325 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 HAUS1Q96CS2 278 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 KCNQ3O43525 872 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 POLA2Q14181 598 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 DPP9Q86TI2 863 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 MCUR1Q96AQ8 359 aa18.5■□□□□ 0.55
SCARB1-205ENST00000538291 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-205ENST00000538291 ZNF131P52739 623 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 VSIG1Q86XK7 387 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 USP44Q9H0E7 712 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 TMC4Q7Z404 712 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 CACNA2D3Q8IZS8 1091 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 LRRIQ4A6NIV6 560 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 CTAGE3PQ8IX95 158 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 METTL14Q9HCE5 456 aaKnown RBP18.49■□□□□ 0.55
SCARB1-205ENST00000538291 PCDHA1Q9Y5I3 950 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 SPDYE16A6NNV3 312 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-205ENST00000538291 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
SCARB1-205ENST00000538291 TFDP1Q14186 410 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-205ENST00000538291 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
SCARB1-205ENST00000538291 KCNJ18B7U540 433 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 IFNB1P01574 187 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 ABCB4P21439 1286 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.553e-14■■■■□ 21.3
SCARB1-205ENST00000538291 KCNJ12Q14500 433 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 PLCB4Q15147 1175 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 ME3Q16798 604 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 AOC3Q16853 763 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 ARHGAP24Q8N264 748 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 PFKFB1P16118 471 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 POLR2BP30876 1174 aaKnown RBP18.48■□□□□ 0.55
SCARB1-205ENST00000538291 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
SCARB1-205ENST00000538291 PSMD6Q15008 389 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 OGFRQ9NZT2 677 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 PDE6CP51160 858 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 RPS6KC1Q96S38 1066 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 VCX3BQ9H321 246 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms