RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ERCC5P28715 1186 aaPredicted RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 SCNN1DP51172 638 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 STX17P56962 302 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 MSL1Q68DK7 614 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 UBA5Q9GZZ9 404 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 KCNQ5Q9NR82 932 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 PCDHAC2Q9Y5I4 1007 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 CCDC194A0A1B0GVG4 234 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 RRP9O43818 475 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 MMP10P09238 476 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 PDHBP11177 359 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 DPP8Q6V1X1 898 aaPredicted RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 CCDC148Q8NFR7 591 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 PPP1R13BQ96KQ4 1090 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 GSDMAQ96QA5 445 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 PIGSQ96S52 555 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 ZNF287Q9HBT7 754 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 MTMR4Q9NYA4 1195 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
PTPRR-205ENST00000537619 TTF2Q9UNY4 1162 aaKnown RBP10.58□□□□□ -0.72
PTPRR-205ENST00000537619 SYNRGQ9UMZ2 1314 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 ZNF646O15015 1829 aaPredicted RBP10.57□□□□□ -0.72
PTPRR-205ENST00000537619 EDIL3O43854 480 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 SHMT1P34896 483 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 LONP1P36776 959 aaKnown RBP10.57□□□□□ -0.72
PTPRR-205ENST00000537619 KCNJ6P48051 423 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
PTPRR-205ENST00000537619 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 APOBEC3HQ6NTF7 200 aaKnown RBP10.57□□□□□ -0.72
PTPRR-205ENST00000537619 CDC42EP5Q6NZY7 148 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 ZFPM1Q8IX07 1006 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 IQUBQ8NA54 791 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 SUGT1Q9Y2Z0 365 aa10.57□□□□□ -0.72
PTPRR-205ENST00000537619 A0A1B0GTH6 734 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 PLSCR1O15162 318 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 TEX33O43247 280 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 SNHG28P0DPA3 235 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 NAPAP54920 295 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 NFIAQ12857 509 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 HSP90AA2PQ14568 343 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 NR1I3Q14994 352 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 SHROOM1Q2M3G4 852 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 SPATA1Q5VX52 437 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 GALNT17Q6IS24 598 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 RIOX1Q9H6W3 641 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 USP40Q9NVE5 1235 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 CTNND2Q9UQB3 1225 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 SIPA1L1O43166 1804 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 APBA3O96018 575 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-205ENST00000537619 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 TC2NQ8N9U0 490 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 DNAJC18Q9H819 358 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 DBNDD1Q9H9R9 158 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 GDAQ9Y2T3 454 aa10.56□□□□□ -0.72
PTPRR-205ENST00000537619 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
PTPRR-205ENST00000537619 KLRC4O43908 158 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 PBX1P40424 430 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 CT47A1Q5JQC4 288 aaPredicted RBP10.55□□□□□ -0.72
PTPRR-205ENST00000537619 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
PTPRR-205ENST00000537619 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 CCDC34Q96HJ3 373 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 C10orf71Q711Q0 1435 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 SCN9AQ15858 1988 aa10.55□□□□□ -0.72
PTPRR-205ENST00000537619 FANCGO15287 622 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 PPP1R11O60927 126 aaPredicted RBP10.54□□□□□ -0.72
PTPRR-205ENST00000537619 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
PTPRR-205ENST00000537619 CDK11BP21127 795 aaKnown RBP10.54□□□□□ -0.72
PTPRR-205ENST00000537619 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 STAT6P42226 847 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 JAKMIP3Q5VZ66 844 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 TTBK2Q6IQ55 1244 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
PTPRR-205ENST00000537619 COA7Q96BR5 231 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 PLIN2Q99541 437 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 CCSER1Q9C0I3 900 aa10.54□□□□□ -0.72
PTPRR-205ENST00000537619 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms