RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 YARSP54577 528 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 PPP1R16BQ96T49 567 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 M0QZ92 97 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 ATP5DP30049 168 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 RSAD2Q8WXG1 361 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
SPG11-203ENST00000535302 NR1I2O75469 434 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 CHRNDQ07001 517 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 BRD3Q15059 726 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
SPG11-203ENST00000535302 PFKFB1P16118 471 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 ATF7P17544 494 aaPredicted RBP13.91□□□□□ -0.18
SPG11-203ENST00000535302 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 TSC1Q92574 1164 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 TEKT1Q969V4 418 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
SPG11-203ENST00000535302 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 GREM2Q9H772 168 aa13.91□□□□□ -0.18
SPG11-203ENST00000535302 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
SPG11-203ENST00000535302 LPXNO60711 386 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 XPO4Q9C0E2 1151 aaKnown RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 XAB2Q9HCS7 855 aaKnown RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 INPP5FQ9Y2H2 1132 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 PKP1Q13835 747 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 PALM2Q8IXS6 379 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 TBX22Q9Y458 520 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 POLA2Q14181 598 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 PTPN22Q9Y2R2 807 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 NAA35Q5VZE5 725 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 RYBPQ8N488 228 aaPredicted RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 MCUQ8NE86 351 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 KRT12Q99456 494 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 KDRP35968 1356 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 TRIM14Q14142 442 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 LONRF2Q1L5Z9 754 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 PEX26Q7Z412 305 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 SLC39A2Q9NP94 309 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 K7ENM7 598 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 ALDH1B1P30837 517 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 INPP5BP32019 993 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
SPG11-203ENST00000535302 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
SPG11-203ENST00000535302 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.19
SPG11-203ENST00000535302 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 TTBK2Q6IQ55 1244 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 LMNTD2Q8IXW0 634 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 EAF2Q96CJ1 260 aaPredicted RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 RRAGDQ9NQL2 400 aaPredicted RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 MLKLQ8NB16 471 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 CFAP65Q6ZU64 1925 aaKnown RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 H7C1D1 291 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 CAPN9O14815 690 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 PHKG2P15735 406 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 MYLK4Q86YV6 388 aaPredicted RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 CLIC4Q9Y696 253 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 NME8Q8N427 588 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 AFAP1L2Q8N4X5 818 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 SYNDIG1LA6NDD5 238 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
SPG11-203ENST00000535302 DPH5Q9H2P9 285 aa13.89□□□□□ -0.19
SPG11-203ENST00000535302 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
SPG11-203ENST00000535302 SUPT20HQ8NEM7 779 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 PANK4Q9NVE7 773 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 CSADQ9Y600 493 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 RASSF4Q9H2L5 321 aa13.88□□□□□ -0.19
SPG11-203ENST00000535302 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms