RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 VCAM1P19320 739 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
SCARB1-204ENST00000535005 GTF2A2P52657 109 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 FUT2Q10981 343 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 MOGSQ13724 837 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 FASTKD5Q7L8L6 764 aaKnown RBP14.24□□□□□ -0.13
SCARB1-204ENST00000535005 SPICE1Q8N0Z3 855 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 CCDC102AQ96A19 550 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
SCARB1-204ENST00000535005 NOL7Q9UMY1 257 aaKnown RBP14.24□□□□□ -0.13
SCARB1-204ENST00000535005 CPLX1O14810 134 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 RAD21O60216 631 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 SLC10A3P09131 477 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
SCARB1-204ENST00000535005 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
SCARB1-204ENST00000535005 SPZ1Q9BXG8 430 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 RIOX1Q9H6W3 641 aa14.23□□□□□ -0.13
SCARB1-204ENST00000535005 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
SCARB1-204ENST00000535005 FRMPD2Q68DX3 1309 aaPredicted RBP14.23□□□□□ -0.13
SCARB1-204ENST00000535005 CDKL5O76039 1030 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 PLEKHA8P1O95397 391 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 CETPP11597 493 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 DGKZQ13574 1117 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 NSUN7Q8NE18 718 aaKnown RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 CHURC1Q8WUH1 139 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 FEM1BQ9UK73 627 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 PTPRFP10586 1907 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 TESPA1A2RU30 521 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 RASSF10A6NK89 507 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 HOXA7P31268 230 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 TTBK2Q6IQ55 1244 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
SCARB1-204ENST00000535005 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-204ENST00000535005 CYTH3O43739 400 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 GPAT2Q6NUI2 795 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 MTMR8Q96EF0 704 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
SCARB1-204ENST00000535005 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.13
SCARB1-204ENST00000535005 LOC285556D6RIA3 1793 aa14.21□□□□□ -0.14
SCARB1-204ENST00000535005 MYPNQ86TC9 1320 aa14.21□□□□□ -0.14
SCARB1-204ENST00000535005 CNTNAP5Q8WYK1 1306 aa14.21□□□□□ -0.14
SCARB1-204ENST00000535005 STK36Q9NRP7 1315 aa14.21□□□□□ -0.14
SCARB1-204ENST00000535005 PRPF3O43395 683 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 FMNL1O95466 1100 aaPredicted RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 STAT2P52630 851 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 HMGN5P82970 282 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 SYDE2Q5VT97 1194 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 GADL1Q6ZQY3 521 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 RBM27Q9P2N5 1060 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 SLC45A1Q9Y2W3 748 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 MANSC4A6NHS7 340 aaPredicted RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 DYNC1I1O14576 645 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 SLC16A2P36021 539 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 INHBEP58166 350 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 SSRP1Q08945 709 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 TREML2Q5T2D2 321 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 ADGRF4Q8IZF3 695 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 CMTR1Q8N1G2 835 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 PRPF38AQ8NAV1 312 aaKnown RBP14.2□□□□□ -0.14
SCARB1-204ENST00000535005 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 JMJD4Q9H9V9 463 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
SCARB1-204ENST00000535005 CCL15-CCL14A0A0B4J2E2 113 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 JAK2O60674 1132 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 FDX1P10109 184 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 FDPSP14324 419 aaKnown RBP14.19□□□□□ -0.14
SCARB1-204ENST00000535005 COG2Q14746 738 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 CCL15Q16663 113 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 ANKRD23Q86SG2 305 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 TRIM22Q8IYM9 498 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 CCDC82Q8N4S0 544 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 PHKBQ93100 1093 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 SLF1Q9BQI6 1058 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms