RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 FAM221BA6H8Z2 402 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 PDPK1O15530 556 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 NAT2P11245 290 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 RASA3Q14644 834 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 SV2CQ496J9 727 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 USHBP1Q8N6Y0 703 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 FLCNQ8NFG4 579 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 LGR4Q9BXB1 951 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 PAK6Q9NQU5 681 aaPredicted RBP9.79□□□□□ -0.84
CASP4-213ENST00000534356 SUGT1Q9Y2Z0 365 aa9.79□□□□□ -0.84
CASP4-213ENST00000534356 H0Y8X5 98 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 WNT11O96014 354 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 PPP2R5DQ14738 602 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 CRTC3Q6UUV7 619 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 MKL1Q969V6 931 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 DEPDC7Q96QD5 511 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 ZSWIM4Q9H7M6 989 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 SNTG2Q9NY99 539 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 DIS3Q9Y2L1 958 aaKnown RBP9.78□□□□□ -0.84
CASP4-213ENST00000534356 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
CASP4-213ENST00000534356 LTKP29376 864 aa9.77□□□□□ -0.85
CASP4-213ENST00000534356 BMS1Q14692 1282 aaKnown RBP9.77□□□□□ -0.85
CASP4-213ENST00000534356 ARTNQ5T4W7 220 aa9.77□□□□□ -0.85
CASP4-213ENST00000534356 ARHGEF39Q8N4T4 335 aa9.77□□□□□ -0.85
CASP4-213ENST00000534356 PPP1R14AQ96A00 147 aa9.77□□□□□ -0.85
CASP4-213ENST00000534356 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
CASP4-213ENST00000534356 SRPK1Q96SB4 655 aaKnown RBP9.77□□□□□ -0.85
CASP4-213ENST00000534356 CARS2Q9HA77 564 aaKnown RBP9.77□□□□□ -0.85
CASP4-213ENST00000534356 CGGBP1Q9UFW8 167 aaPredicted RBP9.77□□□□□ -0.85
CASP4-213ENST00000534356 GSNP06396 782 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 EGR3Q06889 387 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 RASGRF1Q13972 1273 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 ANGEL2Q5VTE6 544 aaKnown RBP9.76□□□□□ -0.85
CASP4-213ENST00000534356 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 ST13P5Q8NFI4 369 aaPredicted RBP9.76□□□□□ -0.85
CASP4-213ENST00000534356 ZDHHC15Q96MV8 337 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 EPN3Q9H201 632 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
CASP4-213ENST00000534356 AKT3Q9Y243 479 aa9.76□□□□□ -0.85
CASP4-213ENST00000534356 SYPP08247 313 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 ZP2Q05996 745 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 LINC00116Q8NCU8 138 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 BVESQ8NE79 360 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 PIF1Q9H611 641 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 LMCD1Q9NZU5 365 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 TCFL5Q9UL49 500 aa9.75□□□□□ -0.85
CASP4-213ENST00000534356 SF3B6Q9Y3B4 125 aaKnown RBP9.75□□□□□ -0.85
CASP4-213ENST00000534356 ITGAVP06756 1048 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 BMP8BP34820 402 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 PCBP3P57721 371 aaKnown RBP9.74□□□□□ -0.85
CASP4-213ENST00000534356 SPATC1Q76KD6 591 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 PRDM7Q9NQW5 492 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 LRP2BPQ9P2M1 347 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 EMC9Q9Y3B6 208 aa9.74□□□□□ -0.85
CASP4-213ENST00000534356 VAMP4O75379 141 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 VAV1P15498 845 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 FUT4P22083 530 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 TEKQ02763 1124 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 NFE2L2Q16236 605 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 MTERF2Q49AM1 385 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
CASP4-213ENST00000534356 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 ZNF227Q86WZ6 799 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 TP53INP2Q8IXH6 220 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 MRGPRX3Q96LB0 322 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 ZFP64Q9NPA5 681 aa9.73□□□□□ -0.85
CASP4-213ENST00000534356 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 NOP56O00567 594 aaKnown RBP9.72□□□□□ -0.85
CASP4-213ENST00000534356 TBX1O43435 398 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 FKTNO75072 461 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 SLC12A9Q9BXP2 914 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 PFDN2Q9UHV9 154 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
CASP4-213ENST00000534356 A0A1W2PQU0 124 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 ZNF205O95201 554 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 KCNH1O95259 989 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 TRIM59Q8IWR1 403 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 DNAJC7Q99615 494 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 MCMBPQ9BTE3 642 aa9.71□□□□□ -0.86
CASP4-213ENST00000534356 TMEM82A0PJX8 343 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 AGRPO00253 132 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
CASP4-213ENST00000534356 CD3EP07766 207 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 POU4F1Q01851 419 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 IFRD2Q12894 506 aaPredicted RBP9.7□□□□□ -0.86
CASP4-213ENST00000534356 GRB10Q13322 594 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 PLCL1Q15111 1095 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 DPY19L1Q2PZI1 675 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 RTP2Q5QGT7 225 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 POMZP3Q6PJE2 187 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 ZPBP2Q6X784 338 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 ZNF669Q96BR6 464 aaPredicted RBP9.7□□□□□ -0.86
CASP4-213ENST00000534356 MRFAP1L1Q96HT8 127 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 FCRL3Q96P31 734 aaPredicted RBP9.7□□□□□ -0.86
CASP4-213ENST00000534356 ADAMTS6Q9UKP5 1117 aa9.7□□□□□ -0.86
CASP4-213ENST00000534356 ZNF281Q9Y2X9 895 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms