RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 ATG4DQ86TL0 474 aaPredicted RBP7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 FRAT1Q92837 279 aaPredicted RBP7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 SNX21Q969T3 373 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 IFT57Q9NWB7 429 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 PLAGL2Q9UPG8 496 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 TBX22Q9Y458 520 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 A0A1W2PP64 1363 aa7.2□□□□□ -1.26
CLNS1A-212ENST00000533957 DCCP43146 1447 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 EDC4Q6P2E9 1401 aaKnown RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 NCOA3Q9Y6Q9 1424 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 KIF1AQ12756 1690 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 TULP4Q9NRJ4 1543 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 CD96P40200 585 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 RGS3P49796 1198 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 RIPK4P57078 832 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 JAG1P78504 1218 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 ZNF252P-AS1Q0IIN9 211 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 AOC3Q16853 763 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 TMEM132EQ6IEE7 984 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 PI4K2BQ8TCG2 481 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 ARID3AQ99856 593 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 EMILIN2Q9BXX0 1053 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 SMC4Q9NTJ3 1288 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 ZBTB40Q9NUA8 1239 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 ADAMTS6Q9UKP5 1117 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 COL16A1Q07092 1604 aaPredicted RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 AHDC1Q5TGY3 1603 aaPredicted RBP7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 TMEM94Q12767 1356 aa7.19□□□□□ -1.26
CLNS1A-212ENST00000533957 ADGRL3Q9HAR2 1447 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 TMEM265A0A087WTH1 108 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 EPB41L2O43491 1005 aaKnown RBP7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 KCNA6P17658 529 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 MPRIPQ6WCQ1 1025 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 ARHGAP27Q6ZUM4 889 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 FAM214BQ7L5A3 538 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 GPBAR1Q8TDU6 330 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 FBXO41Q8TF61 875 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 HEXIM2Q96MH2 286 aaKnown RBP7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 RC3H2Q9HBD1 1191 aaKnown RBP7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 CACNA2D2Q9NY47 1150 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
CLNS1A-212ENST00000533957 CEACAM5P06731 702 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 NUCB1Q02818 461 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 NFE2L2Q16236 605 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 BMP2KLQ5H9B9 411 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 RPAP2Q8IXW5 612 aaPredicted RBP7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 TOP6BLQ8N6T0 577 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 C3orf58Q8NDZ4 430 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 PANK1Q8TE04 598 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 HRASLS5Q96KN8 279 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 NECAB3Q96P71 396 aaPredicted RBP7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 PRAM1Q96QH2 718 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 BABAM1Q9NWV8 329 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 CHMP5Q9NZZ3 219 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 BIN2Q9UBW5 565 aaPredicted RBP7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 ABCA3Q99758 1704 aa7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 CPSF1Q10570 1443 aaKnown RBP7.17□□□□□ -1.26
CLNS1A-212ENST00000533957 PNMA6FA0A0J9YX94 578 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 U2SURPO15042 1029 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 HTATSF1O43719 755 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 TRIM27P14373 513 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 BMP6P22004 513 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 ENOX2Q16206 610 aaKnown RBP7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 C22orf23Q9BZE7 217 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 TNKS2Q9H2K2 1166 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 SNX11Q9Y5W9 270 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 ROBO2Q9HCK4 1378 aa7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 COL3A1P02461 1466 aaPredicted RBP7.16□□□□□ -1.26
CLNS1A-212ENST00000533957 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 TREHO43280 583 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 ZNF853P0CG23 659 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 CASC1Q6TDU7 716 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 HSCBQ8IWL3 235 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 LRRN4CLQ8ND94 238 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 SSH1Q8WYL5 1049 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 ACSBG1Q96GR2 724 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 COG3Q96JB2 828 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 GNEQ9Y223 722 aaKnown RBP7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 CSADQ9Y600 493 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 USP19O94966 1318 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 PTPRCP08575 1304 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 MSH6P52701 1360 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 KIAA0232Q92628 1395 aa7.15□□□□□ -1.26
CLNS1A-212ENST00000533957 MST1RQ04912 1400 aa7.15□□□□□ -1.27
CLNS1A-212ENST00000533957 CDK12Q9NYV4 1490 aaPredicted RBP7.15□□□□□ -1.27
CLNS1A-212ENST00000533957 CRYBG1Q9Y4K1 1723 aa7.15□□□□□ -1.27
CLNS1A-212ENST00000533957 GOLGA6L22H0YM25 854 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms