RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ADAMTS5Q9UNA0 930 aa15.72■□□□□ 0.11
CAPN1-227ENST00000533909 KIAA0100Q14667 2235 aaKnown RBP15.72■□□□□ 0.11
CAPN1-227ENST00000533909 HTTP42858 3142 aa15.72■□□□□ 0.11
CAPN1-227ENST00000533909 ERICH2A1L162 156 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 CYP21A2P08686 494 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 FDX1P10109 184 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 FCER1AP12319 257 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
CAPN1-227ENST00000533909 CCL5P13501 91 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 KCTD2Q14681 263 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
CAPN1-227ENST00000533909 MORN1Q5T089 497 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 RNF208Q9H0X6 261 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 ZSWIM5Q9P217 1185 aa15.71■□□□□ 0.11
CAPN1-227ENST00000533909 TNKSO95271 1327 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 DOCK3Q8IZD9 2030 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 NOVP48745 357 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 MLLT1Q03111 559 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-227ENST00000533909 GRB14Q14449 540 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 RIOX2Q8IUF8 465 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 NCOA7Q8NI08 942 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 MMP19Q99542 508 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 GPCPD1Q9NPB8 672 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 A0A0G2JMZ2 1700 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 RLFQ13129 1914 aa15.7■□□□□ 0.1
CAPN1-227ENST00000533909 FRMPD2Q68DX3 1309 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-227ENST00000533909 E7EWF7 191 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 ADORA2AP29274 412 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 MTFR1Q15390 333 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 IFIT1BQ5T764 474 aaKnown RBP15.69■□□□□ 0.1
CAPN1-227ENST00000533909 RNF20Q5VTR2 975 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 PNMA1Q8ND90 353 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
CAPN1-227ENST00000533909 SLC38A10Q9HBR0 1119 aa15.69■□□□□ 0.1
CAPN1-227ENST00000533909 RAVER2Q9HCJ3 691 aaKnown RBP15.69■□□□□ 0.1
CAPN1-227ENST00000533909 ZNF214Q9UL59 606 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-227ENST00000533909 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
CAPN1-227ENST00000533909 PLA2G6O60733 806 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 OAZ1P54368 228 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 ABRAQ8N0Z2 381 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 ENAHQ8N8S7 591 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-227ENST00000533909 REPS2Q8NFH8 660 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 TRIB2Q92519 343 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 USP6NLQ92738 828 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 HOMER2Q9NSB8 354 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 PRR12Q9ULL5 1215 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 PARP14Q460N5 1801 aa15.68■□□□□ 0.1
CAPN1-227ENST00000533909 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 PDHBP11177 359 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
CAPN1-227ENST00000533909 SLC16A2P36021 539 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
CAPN1-227ENST00000533909 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 DDX11Q96FC9 970 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 HMX1Q9NP08 348 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-227ENST00000533909 FBXO40Q9UH90 709 aa15.67■□□□□ 0.1
CAPN1-227ENST00000533909 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-227ENST00000533909 SLC27A2O14975 620 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
CAPN1-227ENST00000533909 GJB1P08034 283 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 HOXC6P09630 235 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 EN2P19622 333 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-227ENST00000533909 RGS19P49795 217 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 ZNF543Q08ER8 600 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 CCL14Q16627 93 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 CYB5R4Q7L1T6 521 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 ANKRD35Q8N283 1001 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 CHST13Q8NET6 341 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 ANKS1AQ92625 1134 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 RPTORQ8N122 1335 aa15.66■□□□□ 0.1
CAPN1-227ENST00000533909 TFRCP02786 760 aaKnown RBP15.65■□□□□ 0.1
CAPN1-227ENST00000533909 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
CAPN1-227ENST00000533909 ALAS1P13196 640 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 SNAP25P60880 206 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 WTAPQ15007 396 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 ASPRV1Q53RT3 343 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 TMEM67Q5HYA8 995 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 TTBK2Q6IQ55 1244 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 DEFB118Q96PH6 123 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAPN1-227ENST00000533909 PNMA2Q9UL42 364 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 CCPG1Q9ULG6 757 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 TAF6LQ9Y6J9 622 aa15.65■□□□□ 0.1
CAPN1-227ENST00000533909 CENPFP49454 3210 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 REC8O95072 547 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 PGK2P07205 417 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 GOLGA8HP0CJ92 632 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 SNHG28P0DPA3 235 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 MCM5P33992 734 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 TRIM32Q13049 653 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 TKFCQ3LXA3 575 aa15.64■□□□□ 0.09
CAPN1-227ENST00000533909 BTNL9Q6UXG8 535 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms