RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CCDC82Q8N4S0 544 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 FANCBQ8NB91 859 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 PIBF1Q8WXW3 757 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 ZCCHC17Q9NP64 241 aaKnown RBP20.33■□□□□ 0.85
NXF1-216ENST00000533499 CPA4Q9UI42 421 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 PPP1R9AQ9ULJ8 1098 aa20.33■□□□□ 0.85
NXF1-216ENST00000533499 THSD7BQ9C0I4 1608 aa20.33■□□□□ 0.84
NXF1-216ENST00000533499 CA12O43570 354 aa20.32■□□□□ 0.84
NXF1-216ENST00000533499 CMTR1Q8N1G2 835 aaKnown RBP20.32■□□□□ 0.84
NXF1-216ENST00000533499 PRPF38AQ8NAV1 312 aaKnown RBP20.32■□□□□ 0.84
NXF1-216ENST00000533499 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
NXF1-216ENST00000533499 SPDYE16A6NNV3 312 aaPredicted RBP20.31■□□□□ 0.84
NXF1-216ENST00000533499 PEX10O60683 326 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 ZBED4O75132 1171 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 PDIA3P30101 505 aaKnown RBP20.31■□□□□ 0.84
NXF1-216ENST00000533499 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 CPXCR1Q8N123 301 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 FBXL16Q8N461 479 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 ANKRD13CQ8N6S4 541 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 ALDH8A1Q9H2A2 487 aaPredicted RBP20.31■□□□□ 0.84
NXF1-216ENST00000533499 SLKQ9H2G2 1235 aaPredicted RBP20.31■□□□□ 0.84
NXF1-216ENST00000533499 PRR12Q9ULL5 1215 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 TPCN1Q9ULQ1 816 aa20.31■□□□□ 0.84
NXF1-216ENST00000533499 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
NXF1-216ENST00000533499 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
NXF1-216ENST00000533499 GNAQP50148 359 aa20.3■□□□□ 0.84
NXF1-216ENST00000533499 R3HDMLQ9H3Y0 253 aa20.3■□□□□ 0.84
NXF1-216ENST00000533499 NCOA5Q9HCD5 579 aaKnown RBP20.3■□□□□ 0.84
NXF1-216ENST00000533499 RBM28Q9NW13 759 aaKnown RBP20.3■□□□□ 0.84
NXF1-216ENST00000533499 BAZ2BQ9UIF8 2168 aaKnown RBP20.29■□□□□ 0.84
NXF1-216ENST00000533499 CPLX1O14810 134 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
NXF1-216ENST00000533499 HOMER1Q86YM7 354 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 CCAR1Q8IX12 1150 aaKnown RBP20.29■□□□□ 0.84
NXF1-216ENST00000533499 NECAB1Q8N987 351 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 ZNF274Q96GC6 653 aaPredicted RBP20.29■□□□□ 0.84
NXF1-216ENST00000533499 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
NXF1-216ENST00000533499 CCDC196A0A1B0GTZ2 297 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 VWA5AO00534 786 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 TLR2O60603 784 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 PPFIA3O75145 1194 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 CDC27P30260 824 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
NXF1-216ENST00000533499 WDR78Q5VTH9 848 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 ADGRF4Q8IZF3 695 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 GTF3C2Q8WUA4 911 aaPredicted RBP20.28■□□□□ 0.84
NXF1-216ENST00000533499 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 CWC22Q9HCG8 908 aaKnown RBP20.28■□□□□ 0.84
NXF1-216ENST00000533499 WBP1LQ9NX94 342 aa20.28■□□□□ 0.84
NXF1-216ENST00000533499 MYPNQ86TC9 1320 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 PLA2G6O60733 806 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 LARGE1O95461 756 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 ME3Q16798 604 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 BTNL9Q6UXG8 535 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 TMTC3Q6ZXV5 915 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 NBPF11Q86T75 865 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 GPRC5AQ8NFJ5 357 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 RAVER2Q9HCJ3 691 aaKnown RBP20.27■□□□□ 0.84
NXF1-216ENST00000533499 BTBD7Q9P203 1132 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 RBPJLQ9UBG7 517 aa20.27■□□□□ 0.84
NXF1-216ENST00000533499 RLFQ13129 1914 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 hCG_1642624A0A1W2PR95 340 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 RCAN1P53805 252 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 EVCP57679 992 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 CDC37Q16543 378 aaPredicted RBP20.26■□□□□ 0.83
NXF1-216ENST00000533499 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
NXF1-216ENST00000533499 SRBD1Q8N5C6 995 aaKnown RBP20.26■□□□□ 0.83
NXF1-216ENST00000533499 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 PIGSQ96S52 555 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 TXNRD2Q9NNW7 524 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 SAGE1Q9NXZ1 904 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 RABGAP1Q9Y3P9 1069 aa20.26■□□□□ 0.83
NXF1-216ENST00000533499 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 PFKFB2O60825 505 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 ERVK-24P63145 666 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 TMEM132BQ14DG7 1078 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 LBX2Q6XYB7 198 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 RRP36Q96EU6 259 aaKnown RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 SLC38A10Q9HBR0 1119 aa20.25■□□□□ 0.83
NXF1-216ENST00000533499 SEC63Q9UGP8 760 aaKnown RBP20.25■□□□□ 0.83
NXF1-216ENST00000533499 MYH6P13533 1939 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 DTNBO60941 627 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 CNMDO75829 334 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
NXF1-216ENST00000533499 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
NXF1-216ENST00000533499 FDX1P10109 184 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 TAL1P17542 331 aaPredicted RBP20.24■□□□□ 0.83
NXF1-216ENST00000533499 STAT3P40763 770 aa20.24■□□□□ 0.83
NXF1-216ENST00000533499 AKAP17AQ02040 695 aaKnown RBP20.24■□□□□ 0.83
NXF1-216ENST00000533499 SCRN1Q12765 414 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms