RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 MTA3Q9BTC8 594 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 HAUS4Q9H6D7 363 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 NDUFA10O95299 355 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 BMP15O95972 392 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 ATP2B1P20020 1258 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 FGFR2P21802 821 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 KRT9P35527 623 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 SART3Q15020 963 aaKnown RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
CAPN1-224ENST00000533129 REXO2Q9Y3B8 237 aaKnown RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 EPN1Q9Y6I3 576 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 RNF225M0QZC1 329 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 CASP1P29466 404 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 CKAP4Q07065 602 aaKnown RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 STIM1Q13586 685 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 NAPBQ9H115 298 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 A0A087WUV0 522 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 TRIM37O94972 964 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 WTAPQ15007 396 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 PAPD7Q5XG87 772 aaKnown RBP16.62■□□□□ 0.25
CAPN1-224ENST00000533129 IFNL3Q8IZI9 196 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
CAPN1-224ENST00000533129 SLC5A1P13866 664 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 CDC25AP30304 524 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 GUCA1BQ9UMX6 200 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
CAPN1-224ENST00000533129 TMTC2Q8N394 836 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 VPS16Q9H269 839 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
CAPN1-224ENST00000533129 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
CAPN1-224ENST00000533129 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 IQSEC3Q9UPP2 1182 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-224ENST00000533129 TACC3Q9Y6A5 838 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 ARID4AP29374 1257 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-224ENST00000533129 PAK1Q13153 545 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 CHP1Q99653 195 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-224ENST00000533129 TAB2Q9NYJ8 693 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 XBP1P17861 261 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 PLEKHA4Q9H4M7 779 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
CAPN1-224ENST00000533129 XDHP47989 1333 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 ERICH2A1L162 156 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 ATP1A1P05023 1023 aaKnown RBP16.59■□□□□ 0.25
CAPN1-224ENST00000533129 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-224ENST00000533129 OR8K1Q8NGG5 319 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 KRT2P35908 639 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 GGCXP38435 758 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 DNAJC7Q99615 494 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
CAPN1-224ENST00000533129 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-224ENST00000533129 HDAC6Q9UBN7 1215 aa16.59■□□□□ 0.25
CAPN1-224ENST00000533129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.25
CAPN1-224ENST00000533129 ENC1O14682 589 aa16.58■□□□□ 0.25
CAPN1-224ENST00000533129 PPP2R5BQ15173 497 aa16.58■□□□□ 0.25
CAPN1-224ENST00000533129 ZNF654Q8IZM8 581 aa16.58■□□□□ 0.25
CAPN1-224ENST00000533129 DEF6Q9H4E7 631 aa16.58■□□□□ 0.25
CAPN1-224ENST00000533129 FAM205CA6NFA0 338 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 ANKRD65E5RJM6 399 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 CHRNDQ07001 517 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 E2F4Q16254 413 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
CAPN1-224ENST00000533129 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.24
CAPN1-224ENST00000533129 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms