RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 CALM3P0DP25 149 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CYP7A1P22680 504 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CDC25BP30305 580 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 IARSP41252 1262 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TDO2P48775 406 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 KCNQ4P56696 695 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 PPARAQ07869 468 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TRIM29Q14134 588 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 STX1AQ16623 288 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SBK1Q52WX2 424 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SH3D19Q5HYK7 790 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TBC1D9BQ66K14 1250 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SASS6Q6UVJ0 657 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SMIM5Q71RC9 77 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 LYSMD3Q7Z3D4 306 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 NBPF5PQ86XG9 351 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 LCORLQ8N3X6 602 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 RNF214Q8ND24 703 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ESR2Q92731 530 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM84BQ96KN1 310 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 GJD4Q96KN9 370 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 RIOK1Q9BRS2 568 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 RNF26Q9BY78 433 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 FOXP1Q9H334 677 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ATP8A2Q9NTI2 1148 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 RBM28Q9NW13 759 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ANO10Q9NW15 660 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ZSWIM5Q9P217 1185 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 SLC4A4Q9Y6R1 1079 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 TAF1P21675 1872 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 BRWD3Q6RI45 1802 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ROBO3Q96MS0 1386 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 RGPD3A6NKT7 1758 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 RGPD4Q7Z3J3 1758 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 AFF2P51816 1311 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 LTBP1Q14766 1721 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 DDX60LQ5H9U9 1706 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 NRXN2Q9P2S2 1712 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 IFIT3O14879 490 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SPTLC2O15270 562 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 MYO1BO43795 1136 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 DDAH1O94760 285 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ADCY5O95622 1261 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 BMP15O95972 392 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CELA2BP08218 269 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 RHOQP17081 205 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CMA1P23946 247 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 HIBADHP31937 336 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ME1P48163 572 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SRSF11Q05519 484 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SSRP1Q08945 709 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SNW1Q13573 536 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 WTAPQ15007 396 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SLC39A14Q15043 492 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 STK38Q15208 465 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 SEC23AQ15436 765 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CCDC178Q5BJE1 867 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM182BQ5T319 152 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ANO1Q5XXA6 986 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 KANK3Q6NY19 840 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM173BQ6P4H8 233 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CHST3Q7LGC8 479 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 PRICKLE2Q7Z3G6 844 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 AMIGO3Q86WK7 504 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 IQCA1Q86XH1 822 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 VPS37DQ86XT2 251 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CCAR1Q8IX12 1150 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 FMR1NBQ8N0W7 255 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 WDR66Q8TBY9 1149 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 MAP3K14Q99558 947 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 BPIFA3Q9BQP9 254 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ALG1Q9BT22 464 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ARMT1Q9H993 441 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 CYLDQ9NQC7 956 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 TFIP11Q9UBB9 837 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 ARPP21Q9UBL0 812 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 NAP1L2Q9ULW6 460 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 NAV1Q8NEY1 1877 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 FOCADQ5VW36 1801 aa6.6□□□□□ -1.35
ATPAF1-210ENST00000532925 C10orf71Q711Q0 1435 aa6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 XDHP47989 1333 aa6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 GPR25O00155 361 aa6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 PTMAP06454 111 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 TPM2P07951 284 aa6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 SLC3A2P08195 630 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 XBP1P17861 261 aa6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 GTF2E1P29083 439 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-210ENST00000532925 CDC27P30260 824 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms